Transcription factor | GLI3 (GeneCards) | ||||||||
Model | GLI3_HUMAN.H11MO.0.B | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 11 | ||||||||
Quality | B | ||||||||
Motif rank | 0 | ||||||||
Consensus | nTGGGTGGTYb | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 15 | ||||||||
TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
TF subfamily | GLI-like factors {2.3.3.1} | ||||||||
HGNC | HGNC:4319 | ||||||||
EntrezGene | GeneID:2737 (SSTAR profile) | ||||||||
UniProt ID | GLI3_HUMAN | ||||||||
UniProt AC | P10071 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | GLI3 expression | ||||||||
ReMap ChIP-seq dataset list | GLI3 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 1.54 | 4.567 | 4.463 | 4.567 |
02 | 0.0 | 1.044 | 0.0 | 14.093 |
03 | 0.0 | 0.0 | 14.093 | 1.044 |
04 | 0.0 | 1.044 | 13.049 | 1.044 |
05 | 0.0 | 0.0 | 15.137 | 0.0 |
06 | 0.0 | 0.0 | 0.0 | 15.137 |
07 | 0.0 | 0.0 | 15.137 | 0.0 |
08 | 0.0 | 0.0 | 13.049 | 2.088 |
09 | 1.044 | 0.0 | 1.044 | 13.049 |
10 | 1.044 | 9.918 | 1.044 | 3.132 |
11 | 1.54 | 5.611 | 2.584 | 5.402 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.699 | 0.162 | 0.142 | 0.162 |
02 | -1.883 | -0.952 | -1.883 | 1.197 |
03 | -1.883 | -1.883 | 1.197 | -0.952 |
04 | -1.883 | -0.952 | 1.124 | -0.952 |
05 | -1.883 | -1.883 | 1.265 | -1.883 |
06 | -1.883 | -1.883 | -1.883 | 1.265 |
07 | -1.883 | -1.883 | 1.265 | -1.883 |
08 | -1.883 | -1.883 | 1.124 | -0.478 |
09 | -0.952 | -1.883 | -0.952 | 1.124 |
10 | -0.952 | 0.865 | -0.952 | -0.158 |
11 | -0.699 | 0.343 | -0.313 | 0.309 |