Model info
| Transcription factor | GLI3 (GeneCards) | ||||||||
| Model | GLI3_HUMAN.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 11 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | nTGGGTGGTYb | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 15 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | GLI-like factors {2.3.3.1} | ||||||||
| HGNC | HGNC:4319 | ||||||||
| EntrezGene | GeneID:2737 (SSTAR profile) | ||||||||
| UniProt ID | GLI3_HUMAN | ||||||||
| UniProt AC | P10071 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | GLI3 expression | ||||||||
| ReMap ChIP-seq dataset list | GLI3 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.54 | 4.567 | 4.463 | 4.567 |
| 02 | 0.0 | 1.044 | 0.0 | 14.093 |
| 03 | 0.0 | 0.0 | 14.093 | 1.044 |
| 04 | 0.0 | 1.044 | 13.049 | 1.044 |
| 05 | 0.0 | 0.0 | 15.137 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 15.137 |
| 07 | 0.0 | 0.0 | 15.137 | 0.0 |
| 08 | 0.0 | 0.0 | 13.049 | 2.088 |
| 09 | 1.044 | 0.0 | 1.044 | 13.049 |
| 10 | 1.044 | 9.918 | 1.044 | 3.132 |
| 11 | 1.54 | 5.611 | 2.584 | 5.402 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.699 | 0.162 | 0.142 | 0.162 |
| 02 | -1.883 | -0.952 | -1.883 | 1.197 |
| 03 | -1.883 | -1.883 | 1.197 | -0.952 |
| 04 | -1.883 | -0.952 | 1.124 | -0.952 |
| 05 | -1.883 | -1.883 | 1.265 | -1.883 |
| 06 | -1.883 | -1.883 | -1.883 | 1.265 |
| 07 | -1.883 | -1.883 | 1.265 | -1.883 |
| 08 | -1.883 | -1.883 | 1.124 | -0.478 |
| 09 | -0.952 | -1.883 | -0.952 | 1.124 |
| 10 | -0.952 | 0.865 | -0.952 | -0.158 |
| 11 | -0.699 | 0.343 | -0.313 | 0.309 |