Model info
| Transcription factor | GLIS3 (GeneCards) | ||||||||
| Model | GLIS3_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 10 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | SYGGGGGGTM | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 38 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | GLI-like factors {2.3.3.1} | ||||||||
| HGNC | HGNC:28510 | ||||||||
| EntrezGene | GeneID:169792 (SSTAR profile) | ||||||||
| UniProt ID | GLIS3_HUMAN | ||||||||
| UniProt AC | Q8NEA6 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | GLIS3 expression | ||||||||
| ReMap ChIP-seq dataset list | GLIS3 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.05 | 7.479 | 27.978 | 0.499 |
| 02 | 0.997 | 14.515 | 3.546 | 18.947 |
| 03 | 3.546 | 0.0 | 32.465 | 1.994 |
| 04 | 0.0 | 0.0 | 30.471 | 7.535 |
| 05 | 0.997 | 0.997 | 36.011 | 0.0 |
| 06 | 1.994 | 0.0 | 29.03 | 6.981 |
| 07 | 0.0 | 0.0 | 38.006 | 0.0 |
| 08 | 1.551 | 0.997 | 32.465 | 2.992 |
| 09 | 0.997 | 8.532 | 0.0 | 28.476 |
| 10 | 16.066 | 15.956 | 3.989 | 1.994 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.258 | -0.216 | 1.021 | -2.001 |
| 02 | -1.697 | 0.393 | -0.849 | 0.646 |
| 03 | -0.849 | -2.438 | 1.165 | -1.277 |
| 04 | -2.438 | -2.438 | 1.103 | -0.209 |
| 05 | -1.697 | -1.697 | 1.266 | -2.438 |
| 06 | -1.277 | -2.438 | 1.056 | -0.277 |
| 07 | -2.438 | -2.438 | 1.319 | -2.438 |
| 08 | -1.442 | -1.697 | 1.165 | -0.982 |
| 09 | -1.697 | -0.098 | -2.438 | 1.038 |
| 10 | 0.489 | 0.482 | -0.754 | -1.277 |