Transcription factor | Glis3 | ||||||||
Model | GLIS3_MOUSE.H11MO.0.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 10 | ||||||||
Quality | D | ||||||||
Motif rank | 0 | ||||||||
Consensus | SYGGGGGGTM | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 38 | ||||||||
TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
TF subfamily | GLI-like factors {2.3.3.1} | ||||||||
MGI | MGI:2444289 | ||||||||
EntrezGene | GeneID:226075 (SSTAR profile) | ||||||||
UniProt ID | GLIS3_MOUSE | ||||||||
UniProt AC | Q6XP49 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Glis3 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 2.05 | 7.479 | 27.978 | 0.499 |
02 | 0.997 | 14.515 | 3.546 | 18.947 |
03 | 3.546 | 0.0 | 32.465 | 1.994 |
04 | 0.0 | 0.0 | 30.471 | 7.535 |
05 | 0.997 | 0.997 | 36.011 | 0.0 |
06 | 1.994 | 0.0 | 29.03 | 6.981 |
07 | 0.0 | 0.0 | 38.006 | 0.0 |
08 | 1.551 | 0.997 | 32.465 | 2.992 |
09 | 0.997 | 8.532 | 0.0 | 28.476 |
10 | 16.066 | 15.956 | 3.989 | 1.994 |
A | C | G | T | |
---|---|---|---|---|
01 | -1.258 | -0.216 | 1.021 | -2.001 |
02 | -1.697 | 0.393 | -0.849 | 0.646 |
03 | -0.849 | -2.438 | 1.165 | -1.277 |
04 | -2.438 | -2.438 | 1.103 | -0.209 |
05 | -1.697 | -1.697 | 1.266 | -2.438 |
06 | -1.277 | -2.438 | 1.056 | -0.277 |
07 | -2.438 | -2.438 | 1.319 | -2.438 |
08 | -1.442 | -1.697 | 1.165 | -0.982 |
09 | -1.697 | -0.098 | -2.438 | 1.038 |
10 | 0.489 | 0.482 | -0.754 | -1.277 |