Check the newest release v13
Model info
Transcription factorGRHL1
(GeneCards)
ModelGRHL1_HUMAN.H11DI.0.D
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
D
Motif rank
0
ConsensusnvWWCCdGYYhdnMh
Best auROC (human)0.744
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words500
TF familyGrainyhead-related factors {6.7.1}
TF subfamilyGRH-like proteins {6.7.1.1}
HGNCHGNC:17923
EntrezGeneGeneID:29841
(SSTAR profile)
UniProt IDGRHL1_HUMAN
UniProt ACQ9NZI5
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.86411
0.0005 11.63401
0.0001 15.20636
GTEx tissue expression atlas GRHL1 expression
ReMap ChIP-seq dataset list GRHL1 datasets
Motifs in JASPAR
MA0647.1 (GRHL1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01105.019.042.011.080.024.08.025.062.09.037.04.037.012.016.09.0
02179.08.037.060.033.04.03.024.071.03.012.017.034.03.02.010.0
03273.02.011.031.010.00.01.07.036.02.04.012.043.03.010.055.0
042.0346.07.07.00.07.00.00.00.026.00.00.00.0103.02.00.0
051.00.00.01.06.0448.03.025.00.08.00.01.00.07.00.00.0
065.01.01.00.0193.016.065.0189.00.01.00.02.012.00.01.014.0
074.02.0202.02.00.01.016.01.01.02.063.01.02.03.0194.06.0
081.02.02.02.00.06.00.02.07.0138.08.0322.01.02.00.07.0
092.00.03.04.04.074.08.062.00.07.01.02.018.097.05.0213.0
104.04.04.012.024.064.019.071.03.09.02.03.023.0101.027.0130.0
1117.08.014.015.033.043.014.088.015.010.015.012.029.028.070.089.0
1245.04.024.021.018.020.018.033.033.07.049.024.048.031.048.077.0
134.0130.07.03.09.037.03.013.016.098.017.08.019.0111.05.020.0
1416.02.013.017.0110.0159.026.081.05.06.04.017.06.019.08.011.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
011.203-0.490.293-1.0220.932-0.26-1.328-0.220.679-1.2150.167-1.9750.167-0.938-0.658-1.215
021.735-1.3280.1670.6460.054-1.975-2.234-0.260.814-2.234-0.938-0.5990.083-2.234-2.584-1.114
032.157-2.584-1.022-0.008-1.114-4.4-3.126-1.4540.14-2.584-1.975-0.9380.316-2.234-1.1140.56
04-2.5842.393-1.454-1.454-4.4-1.454-4.4-4.4-4.4-0.181-4.4-4.4-4.41.184-2.584-4.4
05-3.126-4.4-4.4-3.126-1.62.651-2.234-0.22-4.4-1.328-4.4-3.126-4.4-1.454-4.4-4.4
06-1.77-3.126-3.126-4.41.81-0.6580.7261.789-4.4-3.126-4.4-2.584-0.938-4.4-3.126-0.788
07-1.975-2.5841.856-2.584-4.4-3.126-0.658-3.126-3.126-2.5840.695-3.126-2.584-2.2341.815-1.6
08-3.126-2.584-2.584-2.584-4.4-1.6-4.4-2.584-1.4541.476-1.3282.321-3.126-2.584-4.4-1.454
09-2.584-4.4-2.234-1.975-1.9750.855-1.3280.679-4.4-1.454-3.126-2.584-0.5431.124-1.771.909
10-1.975-1.975-1.975-0.938-0.260.711-0.490.814-2.234-1.215-2.584-2.234-0.3021.165-0.1441.416
11-0.599-1.328-0.788-0.7210.0540.316-0.7881.027-0.721-1.114-0.721-0.938-0.074-0.1080.81.039
120.361-1.975-0.26-0.392-0.543-0.439-0.5430.0540.054-1.4540.445-0.260.425-0.0080.4250.894
13-1.9751.416-1.454-2.234-1.2150.167-2.234-0.86-0.6581.135-0.599-1.328-0.491.259-1.77-0.439
14-0.658-2.584-0.86-0.5991.251.617-0.1810.945-1.77-1.6-1.975-0.599-1.6-0.49-1.328-1.022