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Model info
Transcription factorGrhl2
ModelGRHL2_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusRCYdGTYYddChRGh
Best auROC (human)0.965
Best auROC (mouse)0.982
Peak sets in benchmark (human)22
Peak sets in benchmark (mouse)4
Aligned words501
TF familyGrainyhead-related factors {6.7.1}
TF subfamilyGRH-like proteins {6.7.1.1}
MGIMGI:2182543
EntrezGeneGeneID:252973
(SSTAR profile)
UniProt IDGRHL2_MOUSE
UniProt ACQ8K5C0
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.870610000000001
0.0005 10.11466
0.0001 14.99056
GTEx tissue expression atlas Grhl2 expression
Motifs in JASPAR
MA1105.1 (GRHL2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.0287.00.00.00.014.00.00.00.0100.01.00.00.094.03.01.0
020.00.00.00.098.0289.02.0106.00.02.00.02.00.00.00.01.0
0317.03.078.00.061.09.069.0152.00.00.02.00.09.08.053.039.0
040.00.087.00.01.01.018.00.00.00.0202.00.01.01.0189.00.0
050.01.00.01.00.01.00.01.06.084.00.0406.00.00.00.00.0
064.00.00.02.00.042.00.044.00.00.00.00.012.0150.05.0241.0
072.00.00.014.012.049.06.0125.00.00.00.05.023.094.025.0145.0
082.06.020.09.051.013.08.071.08.01.019.03.040.018.0113.0118.0
0932.04.044.021.015.05.01.017.072.06.042.040.028.07.038.0128.0
100.0140.03.04.00.020.00.02.00.0109.05.011.01.0202.01.02.0
110.01.00.00.0147.0207.08.0109.00.05.02.02.04.06.08.01.0
1267.00.084.00.0122.04.022.071.016.00.02.00.017.01.075.019.0
130.048.0173.01.00.01.04.00.02.046.0135.00.01.03.085.01.0
140.00.02.01.038.018.02.040.067.078.024.0228.01.01.00.00.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-4.42.206-4.4-4.4-4.4-0.788-4.4-4.4-4.41.155-3.126-4.4-4.41.093-2.234-3.126
02-4.4-4.4-4.4-4.41.1352.213-2.5841.213-4.4-2.584-4.4-2.584-4.4-4.4-4.4-3.126
03-0.599-2.2340.907-4.40.663-1.2150.7851.572-4.4-4.4-2.584-4.4-1.215-1.3280.5230.219
04-4.4-4.41.016-4.4-3.126-3.126-0.543-4.4-4.4-4.41.856-4.4-3.126-3.1261.789-4.4
05-4.4-3.126-4.4-3.126-4.4-3.126-4.4-3.126-1.60.981-4.42.553-4.4-4.4-4.4-4.4
06-1.975-4.4-4.4-2.584-4.40.293-4.40.339-4.4-4.4-4.4-4.4-0.9381.559-1.772.032
07-2.584-4.4-4.4-0.788-0.9380.445-1.61.377-4.4-4.4-4.4-1.77-0.3021.093-0.221.525
08-2.584-1.6-0.439-1.2150.485-0.86-1.3280.814-1.328-3.126-0.49-2.2340.244-0.5431.2761.32
090.023-1.9750.339-0.392-0.721-1.77-3.126-0.5990.828-1.60.2930.244-0.108-1.4540.1931.401
10-4.41.49-2.234-1.975-4.4-0.439-4.4-2.584-4.41.241-1.77-1.022-3.1261.856-3.126-2.584
11-4.4-3.126-4.4-4.41.5391.88-1.3281.241-4.4-1.77-2.584-2.584-1.975-1.6-1.328-3.126
120.756-4.40.981-4.41.353-1.975-0.3460.814-0.658-4.4-2.584-4.4-0.599-3.1260.868-0.49
13-4.40.4251.701-3.126-4.4-3.126-1.975-4.4-2.5840.3831.454-4.4-3.126-2.2340.993-3.126
14-4.4-4.4-2.584-3.1260.193-0.543-2.5840.2440.7560.907-0.261.977-3.126-3.126-4.4-4.4