We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorGSC
(GeneCards)
ModelGSC_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusddvGGATTAdb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1242
TF familyPaired-related HD factors {3.1.3}
TF subfamilyGSC {3.1.3.9}
HGNCHGNC:4612
EntrezGeneGeneID:145258
(SSTAR profile)
UniProt IDGSC_HUMAN
UniProt ACP56915
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.915575
0.0005 5.357015
0.0001 8.031775
GTEx tissue expression atlas GSC expression
ReMap ChIP-seq dataset list GSC datasets
Motifs in JASPAR
PCM
ACGT
01586.5147.5282.5224.5
02461.25147.25357.25275.25
03220.75413.75446.75159.75
0465.578.51092.54.5
0541.04.01192.04.0
061238.03.00.00.0
070.00.00.01241.0
080.00.00.01241.0
091235.50.51.53.5
10411.25115.25492.25222.25
11177.5430.5387.5245.5
PWM
ACGT
010.634-0.737-0.093-0.321
020.395-0.7390.14-0.119
03-0.3380.2860.363-0.658
04-1.534-1.3581.255-3.906
05-1.987-3.9891.342-3.989
061.38-4.178-5.166-5.166
07-5.166-5.166-5.1661.382
08-5.166-5.166-5.1661.382
091.378-4.919-4.555-4.079
100.28-0.9810.459-0.331
11-0.5540.3260.221-0.233