We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorHES1
(GeneCards)
ModelHES1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
D
Motif rank
0
ConsensusvMSvCAMKvGMhv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words28
TF familyHairy-related factors {1.2.4}
TF subfamilyHairy-like factors {1.2.4.1}
HGNCHGNC:5192
EntrezGeneGeneID:3280
(SSTAR profile)
UniProt IDHES1_HUMAN
UniProt ACQ14469
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.156409999999999
0.0005 4.7996099999999995
0.0001 6.10286
GTEx tissue expression atlas HES1 expression
ReMap ChIP-seq dataset list HES1 datasets
Motifs in JASPAR
MA1099.1 (Hes1; Mus musculus)
PCM
ACGT
018.8089.9756.1253.092
0211.78313.30.9331.983
031.5175.36719.61.517
047.46711.96.651.983
050.028.00.00.0
0627.4170.00.00.583
074.08320.4173.50.0
080.02.91720.1834.9
0913.4178.753.2672.567
102.2170.024.7331.05
119.56713.654.7830.0
125.13315.9832.9173.967
1310.38311.6674.4331.517
PWM
ACGT
010.2080.322-0.118-0.691
020.4770.59-1.489-1.023
03-1.204-0.2340.959-1.204
040.0580.486-0.046-1.023
05-2.2411.303-2.241-2.241
061.283-2.241-2.241-1.71
07-0.4660.998-0.592-2.241
08-2.241-0.7370.987-0.312
090.5980.202-0.647-0.835
10-0.943-2.2411.183-1.425
110.2830.615-0.333-2.241
12-0.2720.764-0.737-0.49
130.3590.467-0.397-1.204