Model info
| Transcription factor | HES5 (GeneCards) | ||||||||
| Model | HES5_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | hGGCACGTGYCd | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 6731 | ||||||||
| TF family | Hairy-related factors {1.2.4} | ||||||||
| TF subfamily | Hairy-like factors {1.2.4.1} | ||||||||
| HGNC | HGNC:19764 | ||||||||
| EntrezGene | GeneID:388585 (SSTAR profile) | ||||||||
| UniProt ID | HES5_HUMAN | ||||||||
| UniProt AC | Q5TA89 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | HES5 expression | ||||||||
| ReMap ChIP-seq dataset list | HES5 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1441.216 | 1603.247 | 1124.647 | 3092.078 |
| 02 | 270.898 | 246.653 | 6499.489 | 244.147 |
| 03 | 176.64 | 14.785 | 7065.534 | 4.229 |
| 04 | 4.072 | 7230.802 | 25.374 | 0.94 |
| 05 | 7254.923 | 0.0 | 4.386 | 1.88 |
| 06 | 0.0 | 7254.923 | 5.639 | 0.627 |
| 07 | 0.627 | 0.0 | 7260.561 | 0.0 |
| 08 | 0.0 | 0.627 | 33.832 | 7226.73 |
| 09 | 1.096 | 0.47 | 7258.525 | 1.096 |
| 10 | 56.856 | 4047.172 | 297.96 | 2859.2 |
| 11 | 393.746 | 5956.656 | 477.853 | 432.933 |
| 12 | 2273.222 | 645.009 | 3567.135 | 775.821 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.23 | -0.124 | -0.478 | 0.532 |
| 02 | -1.895 | -1.988 | 1.275 | -1.998 |
| 03 | -2.319 | -4.672 | 1.358 | -5.641 |
| 04 | -5.665 | 1.381 | -4.188 | -6.354 |
| 05 | 1.385 | -6.707 | -5.617 | -6.094 |
| 06 | -6.707 | 1.385 | -5.443 | -6.458 |
| 07 | -6.458 | -6.707 | 1.385 | -6.707 |
| 08 | -6.707 | -6.458 | -3.92 | 1.381 |
| 09 | -6.306 | -6.515 | 1.385 | -6.306 |
| 10 | -3.426 | 0.801 | -1.801 | 0.454 |
| 11 | -1.524 | 1.187 | -1.331 | -1.43 |
| 12 | 0.225 | -1.033 | 0.675 | -0.848 |