Transcription factor | HESX1 (GeneCards) | ||||||||
Model | HESX1_HUMAN.H11MO.0.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 16 | ||||||||
Quality | D | ||||||||
Motif rank | 0 | ||||||||
Consensus | nKCYGRCWCnTRRnhY | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 8 | ||||||||
TF family | Paired-related HD factors {3.1.3} | ||||||||
TF subfamily | HESX {3.1.3.10} | ||||||||
HGNC | HGNC:4877 | ||||||||
EntrezGene | GeneID:8820 (SSTAR profile) | ||||||||
UniProt ID | HESX1_HUMAN | ||||||||
UniProt AC | Q9UBX0 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | HESX1 expression | ||||||||
ReMap ChIP-seq dataset list | HESX1 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 3.514 | 1.571 | 1.457 | 1.457 |
02 | 0.0 | 2.057 | 2.857 | 3.086 |
03 | 0.0 | 4.114 | 3.886 | 0.0 |
04 | 1.029 | 4.114 | 0.0 | 2.857 |
05 | 0.0 | 0.0 | 8.0 | 0.0 |
06 | 1.143 | 0.0 | 5.829 | 1.029 |
07 | 1.029 | 6.971 | 0.0 | 0.0 |
08 | 3.886 | 1.029 | 0.0 | 3.086 |
09 | 3.2 | 4.8 | 0.0 | 0.0 |
10 | 2.171 | 1.029 | 3.771 | 1.029 |
11 | 0.0 | 0.914 | 0.0 | 7.086 |
12 | 3.086 | 0.0 | 3.771 | 1.143 |
13 | 2.971 | 0.914 | 4.114 | 0.0 |
14 | 2.171 | 3.771 | 1.029 | 1.029 |
15 | 2.971 | 3.086 | 0.914 | 1.029 |
16 | 0.257 | 1.286 | 1.171 | 5.286 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.471 | -0.186 | -0.243 | -0.243 |
02 | -1.578 | 0.022 | 0.293 | 0.358 |
03 | -1.578 | 0.609 | 0.559 | -1.578 |
04 | -0.487 | 0.609 | -1.578 | 0.293 |
05 | -1.578 | -1.578 | 1.218 | -1.578 |
06 | -0.416 | -1.578 | 0.924 | -0.487 |
07 | -0.487 | 1.09 | -1.578 | -1.578 |
08 | 0.559 | -0.487 | -1.578 | 0.358 |
09 | 0.389 | 0.747 | -1.578 | -1.578 |
10 | 0.066 | -0.487 | 0.532 | -0.487 |
11 | -1.578 | -0.564 | -1.578 | 1.105 |
12 | 0.358 | -1.578 | 0.532 | -0.416 |
13 | 0.326 | -0.564 | 0.609 | -1.578 |
14 | 0.066 | 0.532 | -0.487 | -0.487 |
15 | 0.326 | 0.358 | -0.564 | -0.487 |
16 | -1.177 | -0.333 | -0.399 | 0.835 |