Model info
| Transcription factor | Hesx1 | ||||||||
| Model | HESX1_MOUSE.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 16 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | nKCYGRCWCnTRRnhY | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 8 | ||||||||
| TF family | Paired-related HD factors {3.1.3} | ||||||||
| TF subfamily | HESX {3.1.3.10} | ||||||||
| MGI | MGI:96071 | ||||||||
| EntrezGene | GeneID:15209 (SSTAR profile) | ||||||||
| UniProt ID | HESX1_MOUSE | ||||||||
| UniProt AC | Q61658 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Hesx1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 3.514 | 1.571 | 1.457 | 1.457 |
| 02 | 0.0 | 2.057 | 2.857 | 3.086 |
| 03 | 0.0 | 4.114 | 3.886 | 0.0 |
| 04 | 1.029 | 4.114 | 0.0 | 2.857 |
| 05 | 0.0 | 0.0 | 8.0 | 0.0 |
| 06 | 1.143 | 0.0 | 5.829 | 1.029 |
| 07 | 1.029 | 6.971 | 0.0 | 0.0 |
| 08 | 3.886 | 1.029 | 0.0 | 3.086 |
| 09 | 3.2 | 4.8 | 0.0 | 0.0 |
| 10 | 2.171 | 1.029 | 3.771 | 1.029 |
| 11 | 0.0 | 0.914 | 0.0 | 7.086 |
| 12 | 3.086 | 0.0 | 3.771 | 1.143 |
| 13 | 2.971 | 0.914 | 4.114 | 0.0 |
| 14 | 2.171 | 3.771 | 1.029 | 1.029 |
| 15 | 2.971 | 3.086 | 0.914 | 1.029 |
| 16 | 0.257 | 1.286 | 1.171 | 5.286 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.471 | -0.186 | -0.243 | -0.243 |
| 02 | -1.578 | 0.022 | 0.293 | 0.358 |
| 03 | -1.578 | 0.609 | 0.559 | -1.578 |
| 04 | -0.487 | 0.609 | -1.578 | 0.293 |
| 05 | -1.578 | -1.578 | 1.218 | -1.578 |
| 06 | -0.416 | -1.578 | 0.924 | -0.487 |
| 07 | -0.487 | 1.09 | -1.578 | -1.578 |
| 08 | 0.559 | -0.487 | -1.578 | 0.358 |
| 09 | 0.389 | 0.747 | -1.578 | -1.578 |
| 10 | 0.066 | -0.487 | 0.532 | -0.487 |
| 11 | -1.578 | -0.564 | -1.578 | 1.105 |
| 12 | 0.358 | -1.578 | 0.532 | -0.416 |
| 13 | 0.326 | -0.564 | 0.609 | -1.578 |
| 14 | 0.066 | 0.532 | -0.487 | -0.487 |
| 15 | 0.326 | 0.358 | -0.564 | -0.487 |
| 16 | -1.177 | -0.333 | -0.399 | 0.835 |