We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorHEY2
(GeneCards)
ModelHEY2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length17
Quality
D
Motif rank
0
ConsensusGKKSGCWCGTGSCnYKv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familyHairy-related factors {1.2.4}
TF subfamilyHairy-like factors {1.2.4.1}
HGNCHGNC:4881
EntrezGeneGeneID:23493
(SSTAR profile)
UniProt IDHEY2_HUMAN
UniProt ACQ9UBP5
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.6139099999999997
0.0005 4.35871
0.0001 5.92941
GTEx tissue expression atlas HEY2 expression
ReMap ChIP-seq dataset list HEY2 datasets
Motifs in JASPAR
PCM
ACGT
010.00.07.030.97
020.01.9394.02.061
030.02.0613.032.909
040.02.0614.970.97
051.0910.06.9090.0
060.06.9090.01.091
074.00.00.973.03
080.07.030.970.0
090.00.977.030.0
100.00.970.07.03
110.00.08.00.0
120.971.9395.0910.0
130.975.9391.0910.0
142.9092.0610.972.061
150.02.0610.974.97
160.02.0612.9093.03
172.9392.0911.971.0
PWM
ACGT
01-1.578-1.5781.097-0.526
02-1.578-0.0240.5840.024
03-1.5780.0240.3430.308
04-1.5780.0240.779-0.526
05-0.447-1.5781.081-1.578
06-1.5781.081-1.578-0.447
070.584-1.578-0.5260.343
08-1.5781.097-0.526-1.578
09-1.578-0.5261.097-1.578
10-1.578-0.526-1.5781.097
11-1.578-1.5781.218-1.578
12-0.526-0.0240.8-1.578
13-0.5260.941-0.447-1.578
140.3080.024-0.5260.024
15-1.5780.024-0.5260.779
16-1.5780.0240.3080.343
170.3170.035-0.012-0.506