We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorHlf
ModelHLF_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
0
ConsensusnvTTRCAYAAbn
Best auROC (human)
Best auROC (mouse)0.973
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)4
Aligned words514
TF familyC/EBP-related {1.1.8}
TF subfamilyPAR factors {1.1.8.2}
MGIMGI:96108
EntrezGeneGeneID:217082
(SSTAR profile)
UniProt IDHLF_MOUSE
UniProt ACQ8BW74
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.225185
0.0005 11.926590000000001
0.0001 15.15503
GTEx tissue expression atlas Hlf expression
Motifs in JASPAR
MA0043.1 (HLF; Homo sapiens)
MA0043.2 (HLF; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0120.028.060.03.034.031.09.02.022.030.053.011.022.058.086.011.0
025.04.01.088.01.05.00.0141.02.08.01.0197.01.04.00.022.0
030.01.04.04.01.02.00.018.00.01.00.01.01.04.025.0418.0
042.00.00.00.06.00.01.01.021.03.02.03.0248.027.0151.015.0
051.0185.00.091.01.026.00.03.01.0148.05.00.00.018.00.01.0
062.01.00.00.0319.029.015.014.01.03.00.01.078.05.00.012.0
0716.0183.018.0183.01.012.01.024.00.011.00.04.00.020.01.06.0
0811.05.01.00.0216.09.01.00.013.07.00.00.0148.053.06.010.0
09363.04.016.05.066.02.00.06.08.00.00.00.06.03.01.00.0
1024.0206.0105.0108.01.07.01.00.00.07.01.09.00.05.04.02.0
116.07.06.06.084.051.018.072.036.026.017.032.041.021.032.025.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.399-0.0680.687-2.1940.1240.032-1.175-2.544-0.3060.00.564-0.982-0.3060.6531.045-0.982
02-1.73-1.936-3.0881.068-3.088-1.73-4.3661.538-2.544-1.287-3.0881.871-3.088-1.936-4.366-0.306
03-4.366-3.088-1.936-1.936-3.088-2.544-4.366-0.502-4.366-3.088-4.366-3.088-3.088-1.936-0.182.622
04-2.544-4.366-4.366-4.366-1.56-4.366-3.088-3.088-0.351-2.194-2.544-2.1942.101-0.1041.606-0.681
05-3.0881.808-4.3661.101-3.088-0.141-4.366-2.194-3.0881.586-1.73-4.366-4.366-0.502-4.366-3.088
06-2.544-3.088-4.366-4.3662.352-0.033-0.681-0.748-3.088-2.194-4.366-3.0880.948-1.73-4.366-0.897
07-0.6181.798-0.5021.798-3.088-0.897-3.088-0.22-4.366-0.982-4.366-1.936-4.366-0.399-3.088-1.56
08-0.982-1.73-3.088-4.3661.963-1.175-3.088-4.366-0.82-1.414-4.366-4.3661.5860.564-1.56-1.074
092.481-1.936-0.618-1.730.782-2.544-4.366-1.56-1.287-4.366-4.366-4.366-1.56-2.194-3.088-4.366
10-0.221.9161.2441.272-3.088-1.414-3.088-4.366-4.366-1.414-3.088-1.175-4.366-1.73-1.936-2.544
11-1.56-1.414-1.56-1.561.0210.525-0.5020.8680.18-0.141-0.5580.0640.309-0.3510.064-0.18