Model info
| Transcription factor | Hlf | ||||||||
| Model | HLF_MOUSE.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dvTTRCAYAAb | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.97 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 4 | ||||||||
| Aligned words | 389 | ||||||||
| TF family | C/EBP-related {1.1.8} | ||||||||
| TF subfamily | PAR factors {1.1.8.2} | ||||||||
| MGI | MGI:96108 | ||||||||
| EntrezGene | GeneID:217082 (SSTAR profile) | ||||||||
| UniProt ID | HLF_MOUSE | ||||||||
| UniProt AC | Q8BW74 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Hlf expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 98.0 | 36.0 | 103.0 | 152.0 |
| 02 | 78.0 | 82.0 | 211.0 | 18.0 |
| 03 | 2.0 | 14.0 | 3.0 | 370.0 |
| 04 | 0.0 | 2.0 | 12.0 | 375.0 |
| 05 | 162.0 | 6.0 | 218.0 | 3.0 |
| 06 | 7.0 | 330.0 | 3.0 | 49.0 |
| 07 | 357.0 | 11.0 | 9.0 | 12.0 |
| 08 | 4.0 | 148.0 | 16.0 | 221.0 |
| 09 | 332.0 | 46.0 | 10.0 | 1.0 |
| 10 | 382.0 | 1.0 | 6.0 | 0.0 |
| 11 | 21.0 | 195.0 | 100.0 | 73.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.008 | -0.968 | 0.057 | 0.441 |
| 02 | -0.217 | -0.168 | 0.766 | -1.623 |
| 03 | -3.342 | -1.852 | -3.09 | 1.325 |
| 04 | -4.193 | -3.342 | -1.99 | 1.338 |
| 05 | 0.504 | -2.579 | 0.799 | -3.09 |
| 06 | -2.454 | 1.211 | -3.09 | -0.671 |
| 07 | 1.289 | -2.067 | -2.242 | -1.99 |
| 08 | -2.889 | 0.415 | -1.731 | 0.812 |
| 09 | 1.217 | -0.732 | -2.151 | -3.68 |
| 10 | 1.357 | -3.68 | -2.579 | -4.193 |
| 11 | -1.479 | 0.688 | 0.027 | -0.282 |