Check the newest release v12
Model info
Transcription factorEN1
(GeneCards)
ModelHME1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensusvbTAATTAvbhhWWWWd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words817
TF familyNK-related factors {3.1.2}
TF subfamilyEN (Engrailed-like factors) {3.1.2.7}
HGNCHGNC:3342
EntrezGeneGeneID:2019
(SSTAR profile)
UniProt IDHME1_HUMAN
UniProt ACQ05925
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.36251
0.0005 5.60551
0.0001 8.24326
GTEx tissue expression atlas EN1 expression
ReMap ChIP-seq dataset list EN1 datasets
Motifs in JASPAR
PCM
ACGT
01248.25202.25268.2597.25
0280.0456.083.0197.0
031.2523.252.25789.25
04808.02.06.00.0
05814.01.01.00.0
060.00.00.0816.0
070.011.015.0790.0
08453.00.0363.00.0
09101.0338.0320.057.0
1077.0378.0118.0243.0
11184.0345.0107.0180.0
12418.0198.058.0142.0
13395.086.028.0307.0
14257.7543.759.75504.75
15380.2542.258.25385.25
16444.2514.2546.25311.25
17279.7577.75107.75350.75
PWM
ACGT
010.195-0.0090.272-0.732
02-0.9240.8-0.887-0.035
03-4.253-2.11-3.9591.347
041.37-4.024-3.288-4.81
051.378-4.342-4.342-4.81
06-4.81-4.81-4.811.38
07-4.81-2.787-2.5121.348
080.793-4.810.573-4.81
09-0.6950.5020.447-1.254
10-0.9610.613-0.5420.174
11-0.1020.522-0.638-0.124
120.713-0.03-1.237-0.359
130.657-0.853-1.9360.406
140.232-1.51-2.890.901
150.619-1.544-3.0310.632
160.774-2.558-1.4570.42
170.314-0.951-0.6310.539