We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEN1
(GeneCards)
ModelHME1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensusvbTAATTAvbhhWWWWd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words817
TF familyNK-related factors {3.1.2}
TF subfamilyEN (Engrailed-like factors) {3.1.2.7}
HGNCHGNC:3342
EntrezGeneGeneID:2019
(SSTAR profile)
UniProt IDHME1_HUMAN
UniProt ACQ05925
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.36251
0.0005 5.60551
0.0001 8.24326
GTEx tissue expression atlas EN1 expression
ReMap ChIP-seq dataset list EN1 datasets
Motifs in JASPAR
PCM
ACGT
01248.25202.25268.2597.25
0280.0456.083.0197.0
031.2523.252.25789.25
04808.02.06.00.0
05814.01.01.00.0
060.00.00.0816.0
070.011.015.0790.0
08453.00.0363.00.0
09101.0338.0320.057.0
1077.0378.0118.0243.0
11184.0345.0107.0180.0
12418.0198.058.0142.0
13395.086.028.0307.0
14257.7543.759.75504.75
15380.2542.258.25385.25
16444.2514.2546.25311.25
17279.7577.75107.75350.75
PWM
ACGT
010.195-0.0090.272-0.732
02-0.9240.8-0.887-0.035
03-4.253-2.11-3.9591.347
041.37-4.024-3.288-4.81
051.378-4.342-4.342-4.81
06-4.81-4.81-4.811.38
07-4.81-2.787-2.5121.348
080.793-4.810.573-4.81
09-0.6950.5020.447-1.254
10-0.9610.613-0.5420.174
11-0.1020.522-0.638-0.124
120.713-0.03-1.237-0.359
130.657-0.853-1.9360.406
140.232-1.51-2.890.901
150.619-1.544-3.0310.632
160.774-2.558-1.4570.42
170.314-0.951-0.6310.539