We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEN2
(GeneCards)
ModelHME2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnnbRRTTRvnn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words9521
TF familyNK-related factors {3.1.2}
TF subfamilyEN (Engrailed-like factors) {3.1.2.7}
HGNCHGNC:3343
EntrezGeneGeneID:2020
(SSTAR profile)
UniProt IDHME2_HUMAN
UniProt ACP19622
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.005665
0.0005 5.33592
0.0001 5.99177
GTEx tissue expression atlas EN2 expression
ReMap ChIP-seq dataset list EN2 datasets
Motifs in JASPAR
MA0642.1 (EN2; Homo sapiens)
PCM
ACGT
012325.4871997.4083118.2562076.85
022122.0162020.8823433.3011941.801
031426.7831454.4941781.5634855.16
044979.274277.1082902.0031359.616
055966.977534.7693015.21.054
061.2051.205227.0899288.502
071.0541.0542920.666595.232
085624.644507.6652037.6861348.005
092487.1571344.9964467.8261218.021
101535.4732725.6933055.2682201.566
111688.1952079.3043647.0822103.419
PWM
ACGT
01-0.023-0.1750.27-0.136
02-0.114-0.1630.366-0.203
03-0.511-0.492-0.2890.713
040.738-2.1430.198-0.559
050.919-1.4890.237-6.568
06-6.524-6.524-2.341.361
07-6.568-6.5680.2051.019
080.86-1.541-0.155-0.568
090.044-0.570.63-0.669
10-0.4380.1360.25-0.078
11-0.343-0.1350.427-0.123