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Model info
Transcription factorHNF1A
(GeneCards)
ModelHNF1A_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
C
Motif rank
0
ConsensusndRKWAATGWTTWMYhn
Best auROC (human)0.928
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words501
TF familyPOU domain factors {3.1.10}
TF subfamilyHNF1-like factors {3.1.10.7}
HGNCHGNC:11621
EntrezGeneGeneID:6927
(SSTAR profile)
UniProt IDHNF1A_HUMAN
UniProt ACP20823
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.289760000000001
0.0005 12.12636
0.0001 15.96991
GTEx tissue expression atlas HNF1A expression
ReMap ChIP-seq dataset list HNF1A datasets
Motifs in JASPAR
MA0046.1 (HNF1A; Vertebrata)
MA0046.2 (HNF1A; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0150.08.063.018.020.07.06.051.041.04.038.011.051.06.092.034.0
0223.05.0129.05.013.01.07.04.026.011.0126.036.010.03.091.010.0
034.06.017.045.01.02.00.017.018.022.026.0287.00.05.013.037.0
044.04.04.011.06.03.01.025.010.013.06.027.044.026.032.0284.0
0561.00.03.00.046.00.00.00.033.01.04.05.0317.01.010.019.0
06363.060.03.031.02.00.00.00.013.01.01.02.013.010.01.00.0
0770.04.010.0307.025.01.01.044.00.00.01.04.010.00.02.021.0
080.00.044.061.00.00.02.03.00.00.08.06.00.00.0230.0146.0
090.00.00.00.00.00.00.00.0195.01.017.071.0171.01.09.035.0
1028.03.019.0316.01.00.00.01.00.04.02.020.08.01.07.090.0
113.02.00.032.01.01.00.06.00.00.01.027.010.029.03.0385.0
128.03.01.02.018.03.02.09.00.01.03.00.0336.012.028.074.0
13287.034.025.016.016.01.00.02.023.03.03.05.060.011.012.02.0
1426.0300.013.047.017.024.00.08.06.026.00.08.06.010.05.04.0
1516.027.03.09.079.0105.09.0167.05.07.00.06.015.025.06.021.0
1640.09.036.030.070.035.06.053.08.02.04.04.050.032.040.081.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.465-1.3280.695-0.543-0.439-1.454-1.60.4850.269-1.9750.193-1.0220.485-1.61.0720.083
02-0.302-1.771.408-1.77-0.86-3.126-1.454-1.975-0.181-1.0221.3850.14-1.114-2.2341.061-1.114
03-1.975-1.6-0.5990.361-3.126-2.584-4.4-0.599-0.543-0.346-0.1812.206-4.4-1.77-0.860.167
04-1.975-1.975-1.975-1.022-1.6-2.234-3.126-0.22-1.114-0.86-1.6-0.1440.339-0.1810.0232.196
050.663-4.4-2.234-4.40.383-4.4-4.4-4.40.054-3.126-1.975-1.772.306-3.126-1.114-0.49
062.4410.646-2.234-0.008-2.584-4.4-4.4-4.4-0.86-3.126-3.126-2.584-0.86-1.114-3.126-4.4
070.8-1.975-1.1142.274-0.22-3.126-3.1260.339-4.4-4.4-3.126-1.975-1.114-4.4-2.584-0.392
08-4.4-4.40.3390.663-4.4-4.4-2.584-2.234-4.4-4.4-1.328-1.6-4.4-4.41.9851.532
09-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.41.821-3.126-0.5990.8141.69-3.126-1.2150.112
10-0.108-2.234-0.492.303-3.126-4.4-4.4-3.126-4.4-1.975-2.584-0.439-1.328-3.126-1.4541.05
11-2.234-2.584-4.40.023-3.126-3.126-4.4-1.6-4.4-4.4-3.126-0.144-1.114-0.074-2.2342.5
12-1.328-2.234-3.126-2.584-0.543-2.234-2.584-1.215-4.4-3.126-2.234-4.42.364-0.938-0.1080.855
132.2060.083-0.22-0.658-0.658-3.126-4.4-2.584-0.302-2.234-2.234-1.770.646-1.022-0.938-2.584
14-0.1812.251-0.860.404-0.599-0.26-4.4-1.328-1.6-0.181-4.4-1.328-1.6-1.114-1.77-1.975
15-0.658-0.144-2.234-1.2150.921.203-1.2151.666-1.77-1.454-4.4-1.6-0.721-0.22-1.6-0.392
160.244-1.2150.14-0.040.80.112-1.60.523-1.328-2.584-1.975-1.9750.4650.0230.2440.945