We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorHnf1b
ModelHNF1B_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusndRTWAATGWTTRMYhn
Best auROC (human)0.953
Best auROC (mouse)0.997
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)8
Aligned words500
TF familyPOU domain factors {3.1.10}
TF subfamilyHNF1-like factors {3.1.10.7}
MGIMGI:98505
EntrezGeneGeneID:21410
(SSTAR profile)
UniProt IDHNF1B_MOUSE
UniProt ACP27889
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.41211
0.0005 10.54081
0.0001 14.99881
GTEx tissue expression atlas Hnf1b expression
Motifs in JASPAR
MA0153.1 (HNF1B; Mus musculus/Homo sapiens)
MA0153.2 (HNF1B; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0149.011.032.014.031.08.011.063.030.05.042.021.056.012.089.026.0
0218.01.0143.04.017.00.012.07.022.09.0126.017.017.04.096.07.0
033.02.07.062.00.02.00.012.010.031.026.0310.01.04.010.020.0
041.03.01.09.09.04.00.026.05.05.04.029.060.028.017.0299.0
0573.00.02.00.040.00.00.00.022.00.00.00.0356.01.05.01.0
06463.020.03.05.01.00.00.00.05.02.00.00.01.00.00.00.0
0724.05.01.0440.02.00.00.020.01.00.02.00.00.00.00.05.0
0814.00.013.00.03.00.02.00.01.00.02.00.0188.00.0277.00.0
09145.01.013.047.00.00.00.00.0231.01.015.047.00.00.00.00.0
1013.07.047.0309.01.00.00.01.02.01.03.022.07.03.011.073.0
110.01.00.022.01.00.00.010.00.00.00.061.08.015.01.0381.0
128.01.00.00.012.01.00.03.00.01.00.00.0328.027.065.054.0
13289.024.027.08.027.01.00.02.043.011.04.07.041.010.02.04.0
1428.0299.016.057.07.030.00.09.02.024.01.06.03.012.02.04.0
159.021.05.05.098.0122.09.0136.03.010.04.02.015.028.014.019.0
1641.013.051.020.085.050.09.037.011.07.05.09.051.032.036.043.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.445-1.0220.023-0.788-0.008-1.328-1.0220.695-0.04-1.770.293-0.3920.578-0.9381.039-0.181
02-0.543-3.1261.511-1.975-0.599-4.4-0.938-1.454-0.346-1.2151.385-0.599-0.599-1.9751.114-1.454
03-2.234-2.584-1.4540.679-4.4-2.584-4.4-0.938-1.114-0.008-0.1812.283-3.126-1.975-1.114-0.439
04-3.126-2.234-3.126-1.215-1.215-1.975-4.4-0.181-1.77-1.77-1.975-0.0740.646-0.108-0.5992.247
050.841-4.4-2.584-4.40.244-4.4-4.4-4.4-0.346-4.4-4.4-4.42.422-3.126-1.77-3.126
062.684-0.439-2.234-1.77-3.126-4.4-4.4-4.4-1.77-2.584-4.4-4.4-3.126-4.4-4.4-4.4
07-0.26-1.77-3.1262.633-2.584-4.4-4.4-0.439-3.126-4.4-2.584-4.4-4.4-4.4-4.4-1.77
08-0.788-4.4-0.86-4.4-2.234-4.4-2.584-4.4-3.126-4.4-2.584-4.41.784-4.42.171-4.4
091.525-3.126-0.860.404-4.4-4.4-4.4-4.41.99-3.126-0.7210.404-4.4-4.4-4.4-4.4
10-0.86-1.4540.4042.28-3.126-4.4-4.4-3.126-2.584-3.126-2.234-0.346-1.454-2.234-1.0220.841
11-4.4-3.126-4.4-0.346-3.126-4.4-4.4-1.114-4.4-4.4-4.40.663-1.328-0.721-3.1262.489
12-1.328-3.126-4.4-4.4-0.938-3.126-4.4-2.234-4.4-3.126-4.4-4.42.34-0.1440.7260.542
132.213-0.26-0.144-1.328-0.144-3.126-4.4-2.5840.316-1.022-1.975-1.4540.269-1.114-2.584-1.975
14-0.1082.247-0.6580.595-1.454-0.04-4.4-1.215-2.584-0.26-3.126-1.6-2.234-0.938-2.584-1.975
15-1.215-0.392-1.77-1.771.1351.353-1.2151.461-2.234-1.114-1.975-2.584-0.721-0.108-0.788-0.49
160.269-0.860.485-0.4390.9930.465-1.2150.167-1.022-1.454-1.77-1.2150.4850.0230.140.316