Check the newest release v12
Model info
Transcription factorHnf1b
ModelHNF1B_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
1
ConsensushhdGTTAATvWTT
Best auROC (human)0.915
Best auROC (mouse)0.992
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)8
Aligned words500
TF familyPOU domain factors {3.1.10}
TF subfamilyHNF1-like factors {3.1.10.7}
MGIMGI:98505
EntrezGeneGeneID:21410
(SSTAR profile)
UniProt IDHNF1B_MOUSE
UniProt ACP27889
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.94876
0.0005 5.92531
0.0001 8.010394999999999
GTEx tissue expression atlas Hnf1b expression
Motifs in JASPAR
MA0153.1 (HNF1B; Mus musculus/Homo sapiens)
MA0153.2 (HNF1B; Homo sapiens)
PCM
ACGT
01105.0164.061.0170.0
02119.079.068.0234.0
03218.012.0179.091.0
0431.02.0452.015.0
055.016.08.0471.0
0639.015.09.0437.0
07486.04.09.01.0
08433.036.011.020.0
0932.03.03.0462.0
10103.0111.0210.076.0
11364.011.015.0110.0
1230.010.060.0400.0
131.032.01.0466.0
PWM
ACGT
01-0.1720.269-0.7050.304
02-0.049-0.452-0.5990.621
030.551-2.2340.355-0.313
04-1.358-3.5731.276-2.034
05-2.961-1.975-2.5841.317
06-1.138-2.034-2.4841.243
071.349-3.126-2.484-3.903
081.234-1.215-2.311-1.77
09-1.328-3.325-3.3251.298
10-0.191-0.1170.514-0.49
111.061-2.311-2.034-0.126
12-1.389-2.394-0.7211.155
13-3.903-1.328-3.9031.307