We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorOnecut1
ModelHNF6_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusdbTATTGATTddYbdddn
Best auROC (human)
Best auROC (mouse)0.977
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)24
Aligned words306
TF familyHD-CUT factors {3.1.9}
TF subfamilyONECUT {3.1.9.1}
MGIMGI:1196423
EntrezGeneGeneID:15379
(SSTAR profile)
UniProt IDHNF6_MOUSE
UniProt ACO08755
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.335459999999999
0.0005 7.842460000000001
0.0001 14.37886
GTEx tissue expression atlas Onecut1 expression
Motifs in JASPAR
MA0679.1 (ONECUT1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0111.010.031.022.04.012.02.019.06.011.010.023.09.011.022.082.0
020.01.01.028.00.01.02.041.00.07.04.054.04.09.028.0105.0
034.00.00.00.018.00.00.00.035.00.00.00.0228.00.00.00.0
040.00.00.0285.00.00.00.00.00.00.00.00.00.00.00.00.0
050.00.00.00.00.00.00.00.00.00.00.00.00.028.00.0257.0
060.00.00.00.00.00.028.00.00.00.00.00.00.00.0257.00.0
070.00.00.00.00.00.00.00.0285.00.00.00.00.00.00.00.0
080.00.00.0285.00.00.00.00.00.00.00.00.00.00.00.00.0
090.00.00.00.00.00.00.00.00.00.00.00.00.057.03.0225.0
100.00.00.00.07.011.013.026.00.00.01.02.028.09.083.0105.0
1111.04.09.011.013.06.00.01.071.08.010.08.019.025.036.053.0
1210.019.05.080.07.012.00.024.010.03.07.035.010.015.06.042.0
134.08.011.014.013.012.01.023.02.04.05.07.013.026.033.0109.0
147.02.014.09.026.04.03.017.011.012.019.08.013.011.063.066.0
1525.013.010.09.012.06.01.010.057.013.015.014.019.015.032.034.0
1627.010.018.058.017.05.01.024.014.08.017.019.05.014.010.038.0
1721.06.010.026.010.011.00.016.04.012.014.016.013.020.024.082.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.47-0.5620.5460.207-1.429-0.386-2.0440.063-1.051-0.47-0.5620.251-0.664-0.470.2071.511
02-3.94-2.597-2.5970.445-3.94-2.597-2.0440.823-3.94-0.904-1.4291.096-1.429-0.6640.4451.758
03-1.429-3.94-3.94-3.940.01-3.94-3.94-3.940.666-3.94-3.94-3.942.531-3.94-3.94-3.94
04-3.94-3.94-3.942.754-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94
05-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.940.445-3.942.651
06-3.94-3.94-3.94-3.94-3.94-3.940.445-3.94-3.94-3.94-3.94-3.94-3.94-3.942.651-3.94
07-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.942.754-3.94-3.94-3.94-3.94-3.94-3.94-3.94
08-3.94-3.94-3.942.754-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94
09-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.94-3.941.15-1.692.518
10-3.94-3.94-3.94-3.94-0.904-0.47-0.3080.372-3.94-3.94-2.597-2.0440.445-0.6641.5241.758
11-0.47-1.429-0.664-0.47-0.308-1.051-3.94-2.5971.368-0.777-0.562-0.7770.0630.3330.6941.077
12-0.5620.063-1.2221.487-0.904-0.386-3.940.293-0.562-1.69-0.9040.666-0.562-0.168-1.0510.847
13-1.429-0.777-0.47-0.236-0.308-0.386-2.5970.251-2.044-1.429-1.222-0.904-0.3080.3720.6081.795
14-0.904-2.044-0.236-0.6640.372-1.429-1.69-0.046-0.47-0.3860.063-0.777-0.308-0.471.2491.295
150.333-0.308-0.562-0.664-0.386-1.051-2.597-0.5621.15-0.308-0.168-0.2360.063-0.1680.5770.637
160.409-0.5620.011.167-0.046-1.222-2.5970.293-0.236-0.777-0.0460.063-1.222-0.236-0.5620.747
170.162-1.051-0.5620.372-0.562-0.47-3.94-0.105-1.429-0.386-0.236-0.105-0.3080.1140.2931.511