We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorHSF1
(GeneCards)
ModelHSF1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusnvbRGAAnnWTCYRGAAn
Best auROC (human)0.997
Best auROC (mouse)0.991
Peak sets in benchmark (human)56
Peak sets in benchmark (mouse)32
Aligned words506
TF familyHSF factors {3.4.1}
TF subfamilyHSF1 (HSTF1) {3.4.1.0.1}
HGNCHGNC:5224
EntrezGeneGeneID:3297
(SSTAR profile)
UniProt IDHSF1_HUMAN
UniProt ACQ00613
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.36021
0.0005 8.78671
0.0001 13.92331
GTEx tissue expression atlas HSF1 expression
ReMap ChIP-seq dataset list HSF1 datasets
Motifs in JASPAR
MA0486.1 (HSF1; Homo sapiens)
MA0486.2 (HSF1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0151.030.018.07.038.059.014.020.033.040.031.014.010.0100.024.011.0
0225.013.038.056.023.063.018.0125.018.028.018.023.05.019.014.014.0
0335.00.036.00.079.06.033.05.046.010.029.03.078.010.0129.01.0
041.01.0236.00.01.00.025.00.01.01.0225.00.00.01.08.00.0
052.00.00.01.02.01.00.00.0474.05.010.05.00.00.00.00.0
06436.08.016.018.04.00.01.01.08.02.00.00.03.01.00.02.0
07122.089.0129.0111.01.03.04.03.01.06.07.03.01.07.05.08.0
0837.031.044.013.035.028.09.033.021.041.063.020.011.019.073.022.0
0912.06.06.080.019.06.01.093.022.016.011.0140.02.05.02.079.0
1010.04.07.034.012.01.00.020.00.01.01.018.018.06.023.0345.0
114.035.00.01.03.09.00.00.01.030.00.00.06.0407.04.00.0
120.04.01.09.03.0171.016.0291.00.02.01.01.01.00.00.00.0
132.00.02.00.0150.010.014.03.011.05.02.00.0142.016.0143.00.0
142.03.0300.00.00.02.029.00.02.00.0159.00.00.00.03.00.0
153.00.01.00.04.01.00.00.0447.06.018.020.00.00.00.00.0
16380.016.042.016.06.00.01.00.07.06.04.02.010.07.02.01.0
17129.080.0121.073.08.09.03.09.022.09.013.05.02.06.07.04.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.485-0.04-0.543-1.4540.1930.63-0.788-0.4390.0540.244-0.008-0.788-1.1141.155-0.26-1.022
02-0.22-0.860.1930.578-0.3020.695-0.5431.377-0.543-0.108-0.543-0.302-1.77-0.49-0.788-0.788
030.112-4.40.14-4.40.92-1.60.054-1.770.383-1.114-0.074-2.2340.907-1.1141.408-3.126
04-3.126-3.1262.011-4.4-3.126-4.4-0.22-4.4-3.126-3.1261.963-4.4-4.4-3.126-1.328-4.4
05-2.584-4.4-4.4-3.126-2.584-3.126-4.4-4.42.708-1.77-1.114-1.77-4.4-4.4-4.4-4.4
062.624-1.328-0.658-0.543-1.975-4.4-3.126-3.126-1.328-2.584-4.4-4.4-2.234-3.126-4.4-2.584
071.3531.0391.4081.259-3.126-2.234-1.975-2.234-3.126-1.6-1.454-2.234-3.126-1.454-1.77-1.328
080.167-0.0080.339-0.860.112-0.108-1.2150.054-0.3920.2690.695-0.439-1.022-0.490.841-0.346
09-0.938-1.6-1.60.932-0.49-1.6-3.1261.082-0.346-0.658-1.0221.49-2.584-1.77-2.5840.92
10-1.114-1.975-1.4540.083-0.938-3.126-4.4-0.439-4.4-3.126-3.126-0.543-0.543-1.6-0.3022.39
11-1.9750.112-4.4-3.126-2.234-1.215-4.4-4.4-3.126-0.04-4.4-4.4-1.62.555-1.975-4.4
12-4.4-1.975-3.126-1.215-2.2341.69-0.6582.22-4.4-2.584-3.126-3.126-3.126-4.4-4.4-4.4
13-2.584-4.4-2.584-4.41.559-1.114-0.788-2.234-1.022-1.77-2.584-4.41.504-0.6581.511-4.4
14-2.584-2.2342.251-4.4-4.4-2.584-0.074-4.4-2.584-4.41.617-4.4-4.4-4.4-2.234-4.4
15-2.234-4.4-3.126-4.4-1.975-3.126-4.4-4.42.649-1.6-0.543-0.439-4.4-4.4-4.4-4.4
162.487-0.6580.293-0.658-1.6-4.4-3.126-4.4-1.454-1.6-1.975-2.584-1.114-1.454-2.584-3.126
171.4080.9321.3450.841-1.328-1.215-2.234-1.215-0.346-1.215-0.86-1.77-2.584-1.6-1.454-1.975