Check the newest release v12
Model info
Transcription factorHSF1
(GeneCards)
ModelHSF1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusbRGAAnbWWCYRGAR
Best auROC (human)0.997
Best auROC (mouse)0.984
Peak sets in benchmark (human)56
Peak sets in benchmark (mouse)32
Aligned words510
TF familyHSF factors {3.4.1}
TF subfamilyHSF1 (HSTF1) {3.4.1.0.1}
HGNCHGNC:5224
EntrezGeneGeneID:3297
(SSTAR profile)
UniProt IDHSF1_HUMAN
UniProt ACQ00613
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.7850099999999998
0.0005 4.94471
0.0001 7.37701
GTEx tissue expression atlas HSF1 expression
ReMap ChIP-seq dataset list HSF1 datasets
Motifs in JASPAR
MA0486.1 (HSF1; Homo sapiens)
MA0486.2 (HSF1; Homo sapiens)
PCM
ACGT
0174.0114.0112.0200.0
02211.028.0245.016.0
036.03.0489.02.0
04475.010.010.05.0
05425.017.027.031.0
06122.094.0148.0136.0
0778.0139.0202.081.0
0854.044.030.0372.0
0958.08.044.0390.0
1026.0472.02.00.0
116.0160.016.0318.0
12282.030.0184.04.0
133.04.0493.00.0
14456.015.015.014.0
15394.033.051.022.0
PWM
ACGT
01-0.516-0.091-0.1080.465
020.519-1.4540.667-1.975
03-2.819-3.3251.355-3.573
041.326-2.394-2.394-2.961
051.215-1.92-1.489-1.358
06-0.024-0.2810.1670.083
07-0.4640.1050.475-0.427
08-0.823-1.022-1.3891.082
09-0.754-2.584-1.0221.129
10-1.5251.32-3.573-4.4
11-2.8190.244-1.9750.926
120.807-1.3890.383-3.126
13-3.325-3.1261.363-4.4
141.285-2.034-2.034-2.096
151.14-1.298-0.879-1.681