Transcription factor | HSF1 (GeneCards) | ||||||||
Model | HSF1_HUMAN.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 15 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | bRGAAnbWWCYRGAR | ||||||||
Best auROC (human) | 0.997 | ||||||||
Best auROC (mouse) | 0.984 | ||||||||
Peak sets in benchmark (human) | 56 | ||||||||
Peak sets in benchmark (mouse) | 32 | ||||||||
Aligned words | 510 | ||||||||
TF family | HSF factors {3.4.1} | ||||||||
TF subfamily | HSF1 (HSTF1) {3.4.1.0.1} | ||||||||
HGNC | HGNC:5224 | ||||||||
EntrezGene | GeneID:3297 (SSTAR profile) | ||||||||
UniProt ID | HSF1_HUMAN | ||||||||
UniProt AC | Q00613 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | HSF1 expression | ||||||||
ReMap ChIP-seq dataset list | HSF1 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 74.0 | 114.0 | 112.0 | 200.0 |
02 | 211.0 | 28.0 | 245.0 | 16.0 |
03 | 6.0 | 3.0 | 489.0 | 2.0 |
04 | 475.0 | 10.0 | 10.0 | 5.0 |
05 | 425.0 | 17.0 | 27.0 | 31.0 |
06 | 122.0 | 94.0 | 148.0 | 136.0 |
07 | 78.0 | 139.0 | 202.0 | 81.0 |
08 | 54.0 | 44.0 | 30.0 | 372.0 |
09 | 58.0 | 8.0 | 44.0 | 390.0 |
10 | 26.0 | 472.0 | 2.0 | 0.0 |
11 | 6.0 | 160.0 | 16.0 | 318.0 |
12 | 282.0 | 30.0 | 184.0 | 4.0 |
13 | 3.0 | 4.0 | 493.0 | 0.0 |
14 | 456.0 | 15.0 | 15.0 | 14.0 |
15 | 394.0 | 33.0 | 51.0 | 22.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.516 | -0.091 | -0.108 | 0.465 |
02 | 0.519 | -1.454 | 0.667 | -1.975 |
03 | -2.819 | -3.325 | 1.355 | -3.573 |
04 | 1.326 | -2.394 | -2.394 | -2.961 |
05 | 1.215 | -1.92 | -1.489 | -1.358 |
06 | -0.024 | -0.281 | 0.167 | 0.083 |
07 | -0.464 | 0.105 | 0.475 | -0.427 |
08 | -0.823 | -1.022 | -1.389 | 1.082 |
09 | -0.754 | -2.584 | -1.022 | 1.129 |
10 | -1.525 | 1.32 | -3.573 | -4.4 |
11 | -2.819 | 0.244 | -1.975 | 0.926 |
12 | 0.807 | -1.389 | 0.383 | -3.126 |
13 | -3.325 | -3.126 | 1.363 | -4.4 |
14 | 1.285 | -2.034 | -2.034 | -2.096 |
15 | 1.14 | -1.298 | -0.879 | -1.681 |