Model info
| Transcription factor | HSF1 (GeneCards) | ||||||||
| Model | HSF1_HUMAN.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 9 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | bKCTGGAAd | ||||||||
| Best auROC (human) | 0.946 | ||||||||
| Best auROC (mouse) | 0.911 | ||||||||
| Peak sets in benchmark (human) | 56 | ||||||||
| Peak sets in benchmark (mouse) | 32 | ||||||||
| Aligned words | 109 | ||||||||
| TF family | HSF factors {3.4.1} | ||||||||
| TF subfamily | HSF1 (HSTF1) {3.4.1.0.1} | ||||||||
| HGNC | HGNC:5224 | ||||||||
| EntrezGene | GeneID:3297 (SSTAR profile) | ||||||||
| UniProt ID | HSF1_HUMAN | ||||||||
| UniProt AC | Q00613 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | HSF1 expression | ||||||||
| ReMap ChIP-seq dataset list | HSF1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 6.0 | 10.0 | 10.0 | 81.0 |
| 02 | 6.0 | 8.0 | 11.0 | 82.0 |
| 03 | 8.0 | 94.0 | 2.0 | 3.0 |
| 04 | 2.0 | 2.0 | 3.0 | 100.0 |
| 05 | 25.0 | 2.0 | 80.0 | 0.0 |
| 06 | 4.0 | 0.0 | 103.0 | 0.0 |
| 07 | 92.0 | 0.0 | 14.0 | 1.0 |
| 08 | 100.0 | 0.0 | 5.0 | 2.0 |
| 09 | 45.0 | 12.0 | 30.0 | 20.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.36 | -0.916 | -0.916 | 1.079 |
| 02 | -1.36 | -1.114 | -0.83 | 1.092 |
| 03 | -1.114 | 1.226 | -2.176 | -1.902 |
| 04 | -2.176 | -2.176 | -1.902 | 1.288 |
| 05 | -0.065 | -2.176 | 1.067 | -3.174 |
| 06 | -1.687 | -3.174 | 1.317 | -3.174 |
| 07 | 1.205 | -3.174 | -0.61 | -2.555 |
| 08 | 1.288 | -3.174 | -1.51 | -2.176 |
| 09 | 0.503 | -0.751 | 0.11 | -0.277 |