We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorHSF1
(GeneCards)
ModelHSF1_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
1
ConsensusbKCTGGAAd
Best auROC (human)0.946
Best auROC (mouse)0.911
Peak sets in benchmark (human)56
Peak sets in benchmark (mouse)32
Aligned words109
TF familyHSF factors {3.4.1}
TF subfamilyHSF1 (HSTF1) {3.4.1.0.1}
HGNCHGNC:5224
EntrezGeneGeneID:3297
(SSTAR profile)
UniProt IDHSF1_HUMAN
UniProt ACQ00613
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.56362
0.0005 6.485855
0.0001 7.978755
GTEx tissue expression atlas HSF1 expression
ReMap ChIP-seq dataset list HSF1 datasets
Motifs in JASPAR
PCM
ACGT
016.010.010.081.0
026.08.011.082.0
038.094.02.03.0
042.02.03.0100.0
0525.02.080.00.0
064.00.0103.00.0
0792.00.014.01.0
08100.00.05.02.0
0945.012.030.020.0
PWM
ACGT
01-1.36-0.916-0.9161.079
02-1.36-1.114-0.831.092
03-1.1141.226-2.176-1.902
04-2.176-2.176-1.9021.288
05-0.065-2.1761.067-3.174
06-1.687-3.1741.317-3.174
071.205-3.174-0.61-2.555
081.288-3.174-1.51-2.176
090.503-0.7510.11-0.277