We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorHsf1
ModelHSF1_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
1
ConsensusbTTCTRGAA
Best auROC (human)0.954
Best auROC (mouse)0.934
Peak sets in benchmark (human)56
Peak sets in benchmark (mouse)32
Aligned words166
TF familyHSF factors {3.4.1}
TF subfamilyHSF1 (HSTF1) {3.4.1.0.1}
MGIMGI:96238
EntrezGeneGeneID:15499
(SSTAR profile)
UniProt IDHSF1_MOUSE
UniProt ACP38532
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.0859000000000005
0.0005 6.1797450000000005
0.0001 7.804735000000001
GTEx tissue expression atlas Hsf1 expression
Motifs in JASPAR
PCM
ACGT
0115.043.070.037.0
027.015.06.0137.0
032.01.011.0151.0
040.0165.00.00.0
051.02.00.0162.0
0645.09.0109.02.0
071.00.0164.00.0
08146.04.06.09.0
09143.09.07.06.0
PWM
ACGT
01-0.960.040.516-0.105
02-1.637-0.96-1.7651.179
03-2.563-2.927-1.2421.276
04-3.5061.364-3.506-3.506
05-2.927-2.563-3.5061.345
060.085-1.420.953-2.563
07-2.927-3.5061.357-3.506
081.242-2.087-1.765-1.42
091.222-1.42-1.637-1.765