Model info
| Transcription factor | Hsf1 | ||||||||
| Model | HSF1_MOUSE.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 9 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | bTTCTRGAA | ||||||||
| Best auROC (human) | 0.954 | ||||||||
| Best auROC (mouse) | 0.934 | ||||||||
| Peak sets in benchmark (human) | 56 | ||||||||
| Peak sets in benchmark (mouse) | 32 | ||||||||
| Aligned words | 166 | ||||||||
| TF family | HSF factors {3.4.1} | ||||||||
| TF subfamily | HSF1 (HSTF1) {3.4.1.0.1} | ||||||||
| MGI | MGI:96238 | ||||||||
| EntrezGene | GeneID:15499 (SSTAR profile) | ||||||||
| UniProt ID | HSF1_MOUSE | ||||||||
| UniProt AC | P38532 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Hsf1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 15.0 | 43.0 | 70.0 | 37.0 |
| 02 | 7.0 | 15.0 | 6.0 | 137.0 |
| 03 | 2.0 | 1.0 | 11.0 | 151.0 |
| 04 | 0.0 | 165.0 | 0.0 | 0.0 |
| 05 | 1.0 | 2.0 | 0.0 | 162.0 |
| 06 | 45.0 | 9.0 | 109.0 | 2.0 |
| 07 | 1.0 | 0.0 | 164.0 | 0.0 |
| 08 | 146.0 | 4.0 | 6.0 | 9.0 |
| 09 | 143.0 | 9.0 | 7.0 | 6.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.96 | 0.04 | 0.516 | -0.105 |
| 02 | -1.637 | -0.96 | -1.765 | 1.179 |
| 03 | -2.563 | -2.927 | -1.242 | 1.276 |
| 04 | -3.506 | 1.364 | -3.506 | -3.506 |
| 05 | -2.927 | -2.563 | -3.506 | 1.345 |
| 06 | 0.085 | -1.42 | 0.953 | -2.563 |
| 07 | -2.927 | -3.506 | 1.357 | -3.506 |
| 08 | 1.242 | -2.087 | -1.765 | -1.42 |
| 09 | 1.222 | -1.42 | -1.637 | -1.765 |