We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorHSF2
(GeneCards)
ModelHSF2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
A
Motif rank
0
ConsensusvSRWbvWKSKvGRh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1043
TF familyHSF factors {3.4.1}
TF subfamilyHSF2 (HSTF2) {3.4.1.0.2}
HGNCHGNC:5225
EntrezGeneGeneID:3298
(SSTAR profile)
UniProt IDHSF2_HUMAN
UniProt ACQ03933
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.07656
0.0005 5.800409999999999
0.0001 7.319615000000001
GTEx tissue expression atlas HSF2 expression
ReMap ChIP-seq dataset list HSF2 datasets
Motifs in JASPAR
MA0770.1 (HSF2; Homo sapiens)
PCM
ACGT
01355.048272.262321.18891.502
0269.90187.452797.13985.508
03780.30971.307121.74366.641
04720.47963.002115.072141.447
05125.82239.616291.406383.158
06316.581197.518432.45193.451
0799.88937.6381.888820.593
0867.12750.45896.355826.06
0946.063826.899125.42441.615
1070.408143.102168.463658.026
11605.289184.919181.54668.246
1217.538123.888842.53456.04
13754.31864.181118.964102.538
14572.811168.932144.063154.193
PWM
ACGT
010.310.0460.21-1.032
02-1.296-1.0771.116-1.099
031.095-1.276-0.751-1.342
041.015-1.397-0.807-0.603
05-0.719-0.0810.1130.386
060.196-0.2730.506-1.011
07-0.946-1.894-1.1411.145
08-1.335-1.612-0.9811.151
09-1.71.152-0.722-1.798
10-1.289-0.592-0.430.925
110.841-0.338-0.356-1.319
12-2.609-0.7341.171-1.511
131.061-1.379-0.774-0.92
140.786-0.428-0.585-0.518