Model info
| Transcription factor | HSF4 (GeneCards) | ||||||||
| Model | HSF4_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 15 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | hvGAAbvTTCYRGAW | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 17390 | ||||||||
| TF family | HSF factors {3.4.1} | ||||||||
| TF subfamily | HSF4 (HSTF4) {3.4.1.0.3} | ||||||||
| HGNC | HGNC:5227 | ||||||||
| EntrezGene | GeneID:3299 (SSTAR profile) | ||||||||
| UniProt ID | HSF4_HUMAN | ||||||||
| UniProt AC | Q9ULV5 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | HSF4 expression | ||||||||
| ReMap ChIP-seq dataset list | HSF4 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 3621.25 | 3040.25 | 2579.25 | 8148.25 |
| 02 | 7860.25 | 3657.25 | 5683.25 | 188.25 |
| 03 | 74.5 | 81.5 | 17157.5 | 75.5 |
| 04 | 17143.75 | 71.75 | 74.75 | 98.75 |
| 05 | 16808.0 | 56.0 | 30.0 | 495.0 |
| 06 | 2208.0 | 6911.0 | 3463.0 | 4807.0 |
| 07 | 5695.0 | 3426.0 | 6568.0 | 1700.0 |
| 08 | 551.0 | 83.0 | 66.0 | 16689.0 |
| 09 | 219.0 | 8.0 | 252.0 | 16910.0 |
| 10 | 1.0 | 17386.0 | 2.0 | 0.0 |
| 11 | 2.0 | 2351.0 | 1925.0 | 13111.0 |
| 12 | 13475.5 | 1615.5 | 2226.5 | 71.5 |
| 13 | 76.25 | 74.25 | 17160.25 | 78.25 |
| 14 | 16227.25 | 492.25 | 240.25 | 429.25 |
| 15 | 11173.5 | 1945.5 | 1899.5 | 2370.5 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.183 | -0.357 | -0.522 | 0.628 |
| 02 | 0.592 | -0.173 | 0.268 | -3.127 |
| 03 | -4.035 | -3.948 | 1.372 | -4.022 |
| 04 | 1.372 | -4.071 | -4.032 | -3.761 |
| 05 | 1.352 | -4.31 | -4.898 | -2.168 |
| 06 | -0.677 | 0.463 | -0.227 | 0.1 |
| 07 | 0.27 | -0.238 | 0.412 | -0.938 |
| 08 | -2.062 | -3.93 | -4.152 | 1.345 |
| 09 | -2.978 | -6.032 | -2.839 | 1.358 |
| 10 | -7.142 | 1.386 | -6.887 | -7.485 |
| 11 | -6.887 | -0.614 | -0.814 | 1.104 |
| 12 | 1.131 | -0.989 | -0.669 | -4.075 |
| 13 | -4.012 | -4.038 | 1.373 | -3.987 |
| 14 | 1.317 | -2.174 | -2.886 | -2.31 |
| 15 | 0.944 | -0.803 | -0.827 | -0.606 |