We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorHSF4
(GeneCards)
ModelHSF4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length15
Quality
D
Motif rank
0
ConsensushvGAAbvTTCYRGAW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words17390
TF familyHSF factors {3.4.1}
TF subfamilyHSF4 (HSTF4) {3.4.1.0.3}
HGNCHGNC:5227
EntrezGeneGeneID:3299
(SSTAR profile)
UniProt IDHSF4_HUMAN
UniProt ACQ9ULV5
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.48061000000000004
0.0005 2.11916
0.0001 5.51961
GTEx tissue expression atlas HSF4 expression
ReMap ChIP-seq dataset list HSF4 datasets
Motifs in JASPAR
PCM
ACGT
013621.253040.252579.258148.25
027860.253657.255683.25188.25
0374.581.517157.575.5
0417143.7571.7574.7598.75
0516808.056.030.0495.0
062208.06911.03463.04807.0
075695.03426.06568.01700.0
08551.083.066.016689.0
09219.08.0252.016910.0
101.017386.02.00.0
112.02351.01925.013111.0
1213475.51615.52226.571.5
1376.2574.2517160.2578.25
1416227.25492.25240.25429.25
1511173.51945.51899.52370.5
PWM
ACGT
01-0.183-0.357-0.5220.628
020.592-0.1730.268-3.127
03-4.035-3.9481.372-4.022
041.372-4.071-4.032-3.761
051.352-4.31-4.898-2.168
06-0.6770.463-0.2270.1
070.27-0.2380.412-0.938
08-2.062-3.93-4.1521.345
09-2.978-6.032-2.8391.358
10-7.1421.386-6.887-7.485
11-6.887-0.614-0.8141.104
121.131-0.989-0.669-4.075
13-4.012-4.0381.373-3.987
141.317-2.174-2.886-2.31
150.944-0.803-0.827-0.606