Transcription factor | HOXB7 (GeneCards) | ||||||||
Model | HXB7_HUMAN.H11MO.0.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 10 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | WTGATTRATK | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 28 | ||||||||
TF family | HOX-related factors {3.1.1} | ||||||||
TF subfamily | HOX6-7 {3.1.1.6} | ||||||||
HGNC | HGNC:5118 | ||||||||
EntrezGene | GeneID:3217 (SSTAR profile) | ||||||||
UniProt ID | HXB7_HUMAN | ||||||||
UniProt AC | P09629 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | HOXB7 expression | ||||||||
ReMap ChIP-seq dataset list | HOXB7 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 8.121 | 0.253 | 1.152 | 18.462 |
02 | 0.0 | 0.0 | 0.0 | 27.988 |
03 | 2.023 | 0.0 | 25.965 | 0.0 |
04 | 27.988 | 0.0 | 0.0 | 0.0 |
05 | 0.0 | 0.0 | 0.0 | 27.988 |
06 | 0.0 | 0.0 | 0.0 | 27.988 |
07 | 13.151 | 0.0 | 9.105 | 5.733 |
08 | 27.089 | 0.899 | 0.0 | 0.0 |
09 | 0.0 | 1.911 | 0.0 | 26.078 |
10 | 2.529 | 1.517 | 15.174 | 8.767 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.134 | -1.976 | -1.372 | 0.902 |
02 | -2.241 | -2.241 | -2.241 | 1.303 |
03 | -1.008 | -2.241 | 1.23 | -2.241 |
04 | 1.303 | -2.241 | -2.241 | -2.241 |
05 | -2.241 | -2.241 | -2.241 | 1.303 |
06 | -2.241 | -2.241 | -2.241 | 1.303 |
07 | 0.58 | -2.241 | 0.238 | -0.176 |
08 | 1.271 | -1.509 | -2.241 | -2.241 |
09 | -2.241 | -1.049 | -2.241 | 1.235 |
10 | -0.845 | -1.203 | 0.715 | 0.204 |