We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorHOXD10
(GeneCards)
ModelHXD10_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
0
ConsensusTGnTYTWRTK
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7
TF familyHOX-related factors {3.1.1}
TF subfamilyHOX9-13 {3.1.1.8}
HGNCHGNC:5133
EntrezGeneGeneID:3236
(SSTAR profile)
UniProt IDHXD10_HUMAN
UniProt ACP28358
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.693815000000001
0.0005 6.248405
0.0001 7.2786
GTEx tissue expression atlas HOXD10 expression
ReMap ChIP-seq dataset list HOXD10 datasets
Motifs in JASPAR
PCM
ACGT
011.0750.2150.2155.495
021.720.05.280.0
030.863.5590.861.72
040.860.00.06.14
050.861.8390.04.301
060.00.00.07.0
074.4190.00.861.72
084.3010.01.8390.86
090.00.00.07.0
100.2150.2151.9364.634
PWM
ACGT
01-0.359-1.159-1.1590.984
02-0.013-1.5250.947-1.525
03-0.5070.593-0.507-0.013
04-0.507-1.525-1.5251.086
05-0.5070.039-1.5250.761
06-1.525-1.525-1.5251.208
070.786-1.525-0.507-0.013
080.761-1.5250.039-0.507
09-1.525-1.525-1.5251.208
10-1.159-1.1590.080.828