We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorID4
(GeneCards)
ModelID4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnnCAGGTGhnn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words210
TF familyHLH domain only {1.2.8}
TF subfamilyId4 {1.2.8.0.4}
HGNCHGNC:5363
EntrezGeneGeneID:3400
(SSTAR profile)
UniProt IDID4_HUMAN
UniProt ACP47928
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.014175
0.0005 5.5775749999999995
0.0001 7.322825
GTEx tissue expression atlas ID4 expression
ReMap ChIP-seq dataset list ID4 datasets
Motifs in JASPAR
PCM
ACGT
0147.034.078.051.0
0267.2544.2564.2534.25
0314.75170.759.7514.75
04188.751.759.759.75
059.013.0183.05.0
066.017.0187.00.0
075.53.514.5186.5
086.753.75190.758.75
0930.577.517.584.5
1059.2556.2552.2542.25
1178.546.554.530.5
PWM
ACGT
01-0.108-0.4210.388-0.028
020.242-0.1660.197-0.414
03-1.2081.162-1.58-1.208
041.262-2.859-1.58-1.58
05-1.65-1.3231.231-2.14
06-1.993-1.0771.252-3.696
07-2.064-2.41-1.2241.25
08-1.896-2.3591.272-1.675
09-0.5250.381-1.050.466
100.1180.067-0.005-0.211
110.394-0.1180.036-0.525