We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorIKZF1
(GeneCards)
ModelIKZF1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length8
Quality
C
Motif rank
0
ConsensusbTGGGARd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words61
TF familyFactors with multiple dispersed zinc fingers {2.3.4}
TF subfamilyIkaros {2.3.4.4}
HGNCHGNC:13176
EntrezGeneGeneID:10320
(SSTAR profile)
UniProt IDIKZF1_HUMAN
UniProt ACQ13422
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.458805
0.0005 6.317705
0.0001 7.486165
GTEx tissue expression atlas IKZF1 expression
ReMap ChIP-seq dataset list IKZF1 datasets
Motifs in JASPAR
PCM
ACGT
012.56417.28214.35926.205
023.4875.3330.051.59
033.3850.057.0260.0
041.1281.84657.4360.0
050.01.02659.3850.0
0651.3850.09.0260.0
0719.3851.84632.2056.974
0825.1282.35922.25610.667
PWM
ACGT
01-1.5030.127-0.0470.524
02-1.274-0.931-2.7561.182
03-1.297-2.7561.281-2.756
04-2.013-1.7261.288-2.756
05-2.756-2.0621.321-2.756
061.179-2.756-0.473-2.756
070.235-1.7260.723-0.701
080.483-1.5610.367-0.322