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Model info
Transcription factorIRF2
(GeneCards)
ModelIRF2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length21
Quality
A
Motif rank
0
ConsensusndRRvnRAAASYGAAASYvvn
Best auROC (human)0.988
Best auROC (mouse)
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)
Aligned words513
TF familyInterferon-regulatory factors {3.5.3}
TF subfamilyIRF-2 {3.5.3.0.2}
HGNCHGNC:6117
EntrezGeneGeneID:3660
(SSTAR profile)
UniProt IDIRF2_HUMAN
UniProt ACP14316
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.48701
0.0005 9.06591
0.0001 14.50186
GTEx tissue expression atlas IRF2 expression
ReMap ChIP-seq dataset list IRF2 datasets
Motifs in JASPAR
MA0051.1 (IRF2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0182.010.044.016.059.020.014.015.098.012.032.08.037.04.037.012.0
02217.09.040.010.015.08.011.012.077.014.022.014.018.06.021.06.0
03279.010.023.015.014.015.02.06.059.012.013.010.017.07.07.011.0
04119.080.0147.023.012.011.07.014.011.012.018.04.012.08.015.07.0
0526.038.023.067.040.024.07.040.046.045.029.067.015.013.013.07.0
067.013.0105.02.044.05.069.02.012.06.049.05.014.01.0165.01.0
0766.01.010.00.023.00.02.00.0363.00.023.02.06.00.04.00.0
08454.02.01.01.01.00.00.00.037.00.02.00.02.00.00.00.0
09492.00.01.01.00.00.01.01.02.00.01.00.01.00.00.00.0
1048.0137.0291.019.00.00.00.00.02.00.01.00.00.02.00.00.0
114.025.00.021.015.057.01.066.024.061.06.0201.01.04.010.04.0
127.00.037.00.027.02.0117.01.01.00.016.00.013.00.0278.01.0
1345.00.03.00.02.00.00.00.0422.00.024.02.00.00.00.02.0
14451.03.015.00.00.00.00.00.026.01.00.00.00.02.02.00.0
15468.01.05.03.04.02.00.00.011.00.05.01.00.00.00.00.0
1616.0176.0282.09.00.03.00.00.00.03.07.00.01.01.02.00.0
172.09.00.06.020.067.04.092.026.059.031.0175.01.03.00.05.0
1816.011.019.03.061.016.036.025.022.05.08.00.095.035.0121.027.0
1996.018.066.014.036.016.08.07.057.037.071.019.016.016.018.05.0
2078.038.056.033.025.024.014.024.037.052.039.035.011.010.017.07.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.957-1.1140.339-0.6580.63-0.439-0.788-0.7211.135-0.9380.023-1.3280.167-1.9750.167-0.938
021.927-1.2150.244-1.114-0.721-1.328-1.022-0.9380.894-0.788-0.346-0.788-0.543-1.6-0.392-1.6
032.178-1.114-0.302-0.721-0.788-0.721-2.584-1.60.63-0.938-0.86-1.114-0.599-1.454-1.454-1.022
041.3280.9321.539-0.302-0.938-1.022-1.454-0.788-1.022-0.938-0.543-1.975-0.938-1.328-0.721-1.454
05-0.1810.193-0.3020.7560.244-0.26-1.4540.2440.3830.361-0.0740.756-0.721-0.86-0.86-1.454
06-1.454-0.861.203-2.5840.339-1.770.785-2.584-0.938-1.60.445-1.77-0.788-3.1261.654-3.126
070.741-3.126-1.114-4.4-0.302-4.4-2.584-4.42.441-4.4-0.302-2.584-1.6-4.4-1.975-4.4
082.665-2.584-3.126-3.126-3.126-4.4-4.4-4.40.167-4.4-2.584-4.4-2.584-4.4-4.4-4.4
092.745-4.4-3.126-3.126-4.4-4.4-3.126-3.126-2.584-4.4-3.126-4.4-3.126-4.4-4.4-4.4
100.4251.4682.22-0.49-4.4-4.4-4.4-4.4-2.584-4.4-3.126-4.4-4.4-2.584-4.4-4.4
11-1.975-0.22-4.4-0.392-0.7210.595-3.1260.741-0.260.663-1.61.851-3.126-1.975-1.114-1.975
12-1.454-4.40.167-4.4-0.144-2.5841.311-3.126-3.126-4.4-0.658-4.4-0.86-4.42.175-3.126
130.361-4.4-2.234-4.4-2.584-4.4-4.4-4.42.592-4.4-0.26-2.584-4.4-4.4-4.4-2.584
142.658-2.234-0.721-4.4-4.4-4.4-4.4-4.4-0.181-3.126-4.4-4.4-4.4-2.584-2.584-4.4
152.695-3.126-1.77-2.234-1.975-2.584-4.4-4.4-1.022-4.4-1.77-3.126-4.4-4.4-4.4-4.4
16-0.6581.7182.189-1.215-4.4-2.234-4.4-4.4-4.4-2.234-1.454-4.4-3.126-3.126-2.584-4.4
17-2.584-1.215-4.4-1.6-0.4390.756-1.9751.072-0.1810.63-0.0081.713-3.126-2.234-4.4-1.77
18-0.658-1.022-0.49-2.2340.663-0.6580.14-0.22-0.346-1.77-1.328-4.41.1040.1121.345-0.144
191.114-0.5430.741-0.7880.14-0.658-1.328-1.4540.5950.1670.814-0.49-0.658-0.658-0.543-1.77
200.9070.1930.5780.054-0.22-0.26-0.788-0.260.1670.5040.2190.112-1.022-1.114-0.599-1.454