Check the newest release v12
Model info
Transcription factorIRF4
(GeneCards)
ModelIRF4_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusndddRvRGAASTGARWvhn
Best auROC (human)0.958
Best auROC (mouse)0.982
Peak sets in benchmark (human)19
Peak sets in benchmark (mouse)61
Aligned words502
TF familyInterferon-regulatory factors {3.5.3}
TF subfamilyIRF-4 (LSIRF, NF-EM5, MUM1, Pip) {3.5.3.0.4}
HGNCHGNC:6119
EntrezGeneGeneID:3662
(SSTAR profile)
UniProt IDIRF4_HUMAN
UniProt ACQ15306
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.442160000000001
0.0005 11.431460000000001
0.0001 15.659510000000001
GTEx tissue expression atlas IRF4 expression
ReMap ChIP-seq dataset list IRF4 datasets
Motifs in JASPAR
MA1419.1 (IRF4; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0184.013.039.030.064.017.08.019.081.09.026.032.016.06.022.034.0
02155.018.045.027.029.06.02.08.051.09.026.09.024.017.025.049.0
03134.015.055.055.029.03.03.015.045.08.023.022.020.05.022.046.0
0452.028.0134.014.016.03.08.04.024.05.068.06.013.014.0106.05.0
0538.09.056.02.032.07.03.08.0160.030.099.027.012.02.014.01.0
0623.02.0211.06.034.05.08.01.036.00.0132.04.011.08.018.01.0
0718.02.083.01.011.01.03.00.019.02.0346.02.00.00.012.00.0
0831.00.03.014.03.00.00.02.0430.03.06.05.03.00.00.00.0
09445.02.09.011.01.00.01.01.06.02.00.01.019.00.00.02.0
1063.0197.0198.013.00.00.04.00.01.03.06.00.00.04.011.00.0
112.07.08.047.016.012.05.0171.014.015.011.0179.01.01.01.010.0
121.00.030.02.08.00.025.02.03.01.018.03.012.00.0384.011.0
1317.01.04.02.01.00.00.00.0411.02.037.07.07.02.07.02.0
14274.031.0119.012.01.02.01.01.010.010.024.04.03.00.04.04.0
15260.013.06.09.026.06.01.010.0109.012.013.014.07.04.07.03.0
1642.0125.0209.026.017.07.05.06.08.012.05.02.08.011.012.05.0
1721.023.011.020.030.052.06.067.054.058.025.094.04.010.08.017.0
1836.012.051.010.061.029.019.034.018.09.05.018.041.047.070.040.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.981-0.860.219-0.040.711-0.599-1.328-0.490.945-1.215-0.1810.023-0.658-1.6-0.3460.083
021.592-0.5430.361-0.144-0.074-1.6-2.584-1.3280.485-1.215-0.181-1.215-0.26-0.599-0.220.445
031.446-0.7210.560.56-0.074-2.234-2.234-0.7210.361-1.328-0.302-0.346-0.439-1.77-0.3460.383
040.504-0.1081.446-0.788-0.658-2.234-1.328-1.975-0.26-1.770.771-1.6-0.86-0.7881.213-1.77
050.193-1.2150.578-2.5840.023-1.454-2.234-1.3281.623-0.041.145-0.144-0.938-2.584-0.788-3.126
06-0.302-2.5841.899-1.60.083-1.77-1.328-3.1260.14-4.41.431-1.975-1.022-1.328-0.543-3.126
07-0.543-2.5840.969-3.126-1.022-3.126-2.234-4.4-0.49-2.5842.393-2.584-4.4-4.4-0.938-4.4
08-0.008-4.4-2.234-0.788-2.234-4.4-4.4-2.5842.61-2.234-1.6-1.77-2.234-4.4-4.4-4.4
092.645-2.584-1.215-1.022-3.126-4.4-3.126-3.126-1.6-2.584-4.4-3.126-0.49-4.4-4.4-2.584
100.6951.8311.836-0.86-4.4-4.4-1.975-4.4-3.126-2.234-1.6-4.4-4.4-1.975-1.022-4.4
11-2.584-1.454-1.3280.404-0.658-0.938-1.771.69-0.788-0.721-1.0221.735-3.126-3.126-3.126-1.114
12-3.126-4.4-0.04-2.584-1.328-4.4-0.22-2.584-2.234-3.126-0.543-2.234-0.938-4.42.497-1.022
13-0.599-3.126-1.975-2.584-3.126-4.4-4.4-4.42.565-2.5840.167-1.454-1.454-2.584-1.454-2.584
142.16-0.0081.328-0.938-3.126-2.584-3.126-3.126-1.114-1.114-0.26-1.975-2.234-4.4-1.975-1.975
152.108-0.86-1.6-1.215-0.181-1.6-3.126-1.1141.241-0.938-0.86-0.788-1.454-1.975-1.454-2.234
160.2931.3771.89-0.181-0.599-1.454-1.77-1.6-1.328-0.938-1.77-2.584-1.328-1.022-0.938-1.77
17-0.392-0.302-1.022-0.439-0.040.504-1.60.7560.5420.613-0.221.093-1.975-1.114-1.328-0.599
180.14-0.9380.485-1.1140.663-0.074-0.490.083-0.543-1.215-1.77-0.5430.2690.4040.80.244