We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorIrf4
ModelIRF4_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusnddWWvvRGAASTGARAvhn
Best auROC (human)0.948
Best auROC (mouse)0.981
Peak sets in benchmark (human)19
Peak sets in benchmark (mouse)61
Aligned words502
TF familyInterferon-regulatory factors {3.5.3}
TF subfamilyIRF-4 (LSIRF, NF-EM5, MUM1, Pip) {3.5.3.0.4}
MGIMGI:1096873
EntrezGeneGeneID:16364
(SSTAR profile)
UniProt IDIRF4_MOUSE
UniProt ACQ64287
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.330860000000001
0.0005 11.400860000000002
0.0001 15.789460000000002
GTEx tissue expression atlas Irf4 expression
Motifs in JASPAR
MA1419.1 (IRF4; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0183.016.067.014.038.015.08.020.047.011.048.013.035.019.036.030.0
02119.011.041.032.026.07.07.021.096.015.025.023.022.017.014.024.0
03193.019.023.028.030.03.010.07.057.012.014.04.031.013.017.039.0
04206.016.042.047.032.04.03.08.038.01.018.07.020.01.07.050.0
0565.034.0179.018.010.08.01.03.020.07.033.010.026.09.070.07.0
0639.016.063.03.047.05.05.01.0146.048.071.018.09.06.021.02.0
0717.05.0217.02.058.03.012.02.050.03.0105.02.05.03.016.00.0
0820.06.0103.01.03.04.06.01.028.010.0307.05.02.00.04.00.0
0946.03.00.04.014.03.01.02.0399.01.05.015.06.01.00.00.0
10430.04.09.022.05.02.00.01.03.02.01.00.011.01.01.08.0
1143.0236.0164.06.01.03.04.01.03.02.05.01.04.017.010.00.0
122.06.02.041.027.019.04.0208.06.010.010.0157.01.00.01.06.0
133.00.033.00.07.00.028.00.00.00.016.01.011.00.0399.02.0
1412.00.08.01.00.00.00.00.0420.02.048.06.00.00.02.01.0
15289.011.0110.022.02.00.00.00.019.02.031.06.03.00.05.00.0
16287.010.09.07.05.03.01.04.0110.011.013.012.018.04.02.04.0
1792.0209.0109.010.011.011.01.05.013.011.01.00.08.011.03.05.0
1842.027.021.034.036.090.06.0110.030.028.011.045.04.03.04.09.0
1943.017.036.016.064.023.025.036.07.013.011.011.046.049.056.047.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.969-0.6580.756-0.7880.193-0.721-1.328-0.4390.404-1.0220.425-0.860.112-0.490.14-0.04
021.328-1.0220.2690.023-0.181-1.454-1.454-0.3921.114-0.721-0.22-0.302-0.346-0.599-0.788-0.26
031.81-0.49-0.302-0.108-0.04-2.234-1.114-1.4540.595-0.938-0.788-1.975-0.008-0.86-0.5990.219
041.875-0.6580.2930.4040.023-1.975-2.234-1.3280.193-3.126-0.543-1.454-0.439-3.126-1.4540.465
050.7260.0831.735-0.543-1.114-1.328-3.126-2.234-0.439-1.4540.054-1.114-0.181-1.2150.8-1.454
060.219-0.6580.695-2.2340.404-1.77-1.77-3.1261.5320.4250.814-0.543-1.215-1.6-0.392-2.584
07-0.599-1.771.927-2.5840.613-2.234-0.938-2.5840.465-2.2341.203-2.584-1.77-2.234-0.658-4.4
08-0.439-1.61.184-3.126-2.234-1.975-1.6-3.126-0.108-1.1142.274-1.77-2.584-4.4-1.975-4.4
090.383-2.234-4.4-1.975-0.788-2.234-3.126-2.5842.536-3.126-1.77-0.721-1.6-3.126-4.4-4.4
102.61-1.975-1.215-0.346-1.77-2.584-4.4-3.126-2.234-2.584-3.126-4.4-1.022-3.126-3.126-1.328
110.3162.0111.648-1.6-3.126-2.234-1.975-3.126-2.234-2.584-1.77-3.126-1.975-0.599-1.114-4.4
12-2.584-1.6-2.5840.269-0.144-0.49-1.9751.885-1.6-1.114-1.1141.604-3.126-4.4-3.126-1.6
13-2.234-4.40.054-4.4-1.454-4.4-0.108-4.4-4.4-4.4-0.658-3.126-1.022-4.42.536-2.584
14-0.938-4.4-1.328-3.126-4.4-4.4-4.4-4.42.587-2.5840.425-1.6-4.4-4.4-2.584-3.126
152.213-1.0221.25-0.346-2.584-4.4-4.4-4.4-0.49-2.584-0.008-1.6-2.234-4.4-1.77-4.4
162.206-1.114-1.215-1.454-1.77-2.234-3.126-1.9751.25-1.022-0.86-0.938-0.543-1.975-2.584-1.975
171.0721.891.241-1.114-1.022-1.022-3.126-1.77-0.86-1.022-3.126-4.4-1.328-1.022-2.234-1.77
180.293-0.144-0.3920.0830.141.05-1.61.25-0.04-0.108-1.0220.361-1.975-2.234-1.975-1.215
190.316-0.5990.14-0.6580.711-0.302-0.220.14-1.454-0.86-1.022-1.0220.3830.4450.5780.404