We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorIrf8
ModelIRF8_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length22
Quality
A
Motif rank
0
ConsensusddWWvdGGAASTGAAASYvvvd
Best auROC (human)
Best auROC (mouse)0.997
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)59
Aligned words513
TF familyInterferon-regulatory factors {3.5.3}
TF subfamilyIRF-8 (ICSBP1) {3.5.3.0.8}
MGIMGI:96395
EntrezGeneGeneID:15900
(SSTAR profile)
UniProt IDIRF8_MOUSE
UniProt ACP23611
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.35336
0.0005 7.1734100000000005
0.0001 13.22906
GTEx tissue expression atlas Irf8 expression
Motifs in JASPAR
MA0652.1 (IRF8; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0177.010.038.014.037.06.02.010.079.09.018.018.022.07.011.022.0
02159.06.026.024.019.04.03.06.049.04.012.04.014.04.013.033.0
03149.014.037.041.012.00.02.04.033.03.09.09.021.02.09.035.0
0457.026.0121.011.015.01.01.02.027.08.018.04.027.06.050.06.0
0550.011.056.09.030.00.06.05.084.028.051.027.08.01.013.01.0
069.02.0161.00.032.00.08.00.040.02.084.00.04.06.029.03.0
079.00.076.00.07.00.03.00.042.00.0240.00.01.00.02.00.0
0856.00.02.01.00.00.00.00.0321.00.00.00.00.00.00.00.0
09372.00.00.05.00.00.00.00.02.00.00.00.01.00.00.00.0
1054.098.0214.09.00.00.00.00.00.00.00.00.00.00.05.00.0
111.05.00.048.021.07.00.070.023.05.00.0191.00.01.00.08.0
120.00.045.00.00.00.018.00.00.00.00.00.01.00.0315.01.0
131.00.00.00.00.00.00.00.0370.01.07.00.01.00.00.00.0
14357.00.014.01.01.00.00.00.07.00.00.00.00.00.00.00.0
15363.00.00.02.00.00.00.00.012.01.00.01.01.00.00.00.0
1610.0143.0221.02.00.01.00.00.00.00.00.00.00.01.02.00.0
171.00.01.08.021.035.00.089.034.047.016.0126.00.01.01.00.0
1820.02.032.02.050.011.012.010.08.01.09.00.056.037.0100.030.0
1943.020.049.022.021.09.010.011.072.022.042.017.08.09.022.03.0
2078.018.039.09.023.015.02.020.045.024.042.012.011.05.020.017.0
2194.018.027.018.020.014.03.025.042.018.027.016.016.08.014.020.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
011.166-0.8440.464-0.5180.438-1.331-2.32-0.8441.191-0.945-0.272-0.272-0.075-1.186-0.752-0.075
021.888-1.3310.0890.01-0.219-1.708-1.968-1.3310.716-1.708-0.668-1.708-0.518-1.708-0.590.325
031.823-0.5180.4380.539-0.668-4.174-2.32-1.7080.325-1.968-0.945-0.945-0.121-2.32-0.9450.383
040.8660.0891.616-0.752-0.451-2.867-2.867-2.320.126-1.058-0.272-1.7080.126-1.3310.736-1.331
050.736-0.7520.849-0.9450.23-4.174-1.331-1.5021.2520.1620.7560.126-1.058-2.867-0.59-2.867
06-0.945-2.321.901-4.1740.294-4.174-1.058-4.1740.515-2.321.252-4.174-1.708-1.3310.197-1.968
07-0.945-4.1741.153-4.174-1.186-4.174-1.968-4.1740.563-4.1742.299-4.174-2.867-4.174-2.32-4.174
080.849-4.174-2.32-2.867-4.174-4.174-4.174-4.1742.59-4.174-4.174-4.174-4.174-4.174-4.174-4.174
092.737-4.174-4.174-1.502-4.174-4.174-4.174-4.174-2.32-4.174-4.174-4.174-2.867-4.174-4.174-4.174
100.8131.4062.185-0.945-4.174-4.174-4.174-4.174-4.174-4.174-4.174-4.174-4.174-4.174-1.502-4.174
11-2.867-1.502-4.1740.696-0.121-1.186-4.1741.071-0.032-1.502-4.1742.071-4.174-2.867-4.174-1.058
12-4.174-4.1740.632-4.174-4.174-4.174-0.272-4.174-4.174-4.174-4.174-4.174-2.867-4.1742.571-2.867
13-2.867-4.174-4.174-4.174-4.174-4.174-4.174-4.1742.731-2.867-1.186-4.174-2.867-4.174-4.174-4.174
142.696-4.174-0.518-2.867-2.867-4.174-4.174-4.174-1.186-4.174-4.174-4.174-4.174-4.174-4.174-4.174
152.712-4.174-4.174-2.32-4.174-4.174-4.174-4.174-0.668-2.867-4.174-2.867-2.867-4.174-4.174-4.174
16-0.8441.7822.217-2.32-4.174-2.867-4.174-4.174-4.174-4.174-4.174-4.174-4.174-2.867-2.32-4.174
17-2.867-4.174-2.867-1.058-0.1210.383-4.1741.310.3540.675-0.3881.656-4.174-2.867-2.867-4.174
18-0.169-2.320.294-2.320.736-0.752-0.668-0.844-1.058-2.867-0.945-4.1740.8490.4381.4260.23
190.587-0.1690.716-0.075-0.121-0.945-0.844-0.7521.099-0.0750.563-0.328-1.058-0.945-0.075-1.968
201.178-0.2720.49-0.945-0.032-0.451-2.32-0.1690.6320.010.563-0.668-0.752-1.502-0.169-0.328
211.364-0.2720.126-0.272-0.169-0.518-1.9680.0510.563-0.2720.126-0.388-0.388-1.058-0.518-0.169