We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorISL1
(GeneCards)
ModelISL1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusnnYTAAKKRvhYhn
Best auROC (human)0.838
Best auROC (mouse)0.918
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)13
Aligned words472
TF familyHD-LIM factors {3.1.5}
TF subfamilyISL {3.1.5.1}
HGNCHGNC:6132
EntrezGeneGeneID:3670
(SSTAR profile)
UniProt IDISL1_HUMAN
UniProt ACP61371
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.58906
0.0005 12.81971
0.0001 15.202449999999999
GTEx tissue expression atlas ISL1 expression
ReMap ChIP-seq dataset list ISL1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
019.028.061.019.044.043.06.034.016.018.046.013.022.030.065.018.0
022.049.023.017.05.070.04.040.017.0104.018.039.01.043.017.023.0
034.00.01.020.075.02.02.0187.012.00.02.048.019.00.02.098.0
0475.03.031.01.00.02.00.00.05.01.01.00.0280.011.060.02.0
05355.01.01.03.017.00.00.00.090.00.00.02.03.00.00.00.0
0617.04.0110.0334.00.00.00.01.00.00.00.01.01.00.02.02.0
078.00.07.03.01.00.02.01.013.00.018.081.09.06.0198.0125.0
081.00.030.00.01.00.01.04.027.023.0166.09.026.09.0158.017.0
0913.014.016.012.018.09.03.02.099.0112.0121.023.010.00.015.05.0
1046.027.030.037.046.032.03.054.069.035.025.026.010.09.06.017.0
1121.025.016.0109.014.037.06.046.02.012.01.049.014.026.018.076.0
1214.05.017.015.027.024.01.048.09.011.010.011.046.041.026.0167.0
1325.015.031.025.025.015.03.038.023.013.07.011.065.042.039.095.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.158-0.0510.72-0.4330.3960.373-1.5430.14-0.601-0.4860.44-0.803-0.2890.0170.783-0.486
02-2.5280.502-0.245-0.542-1.7140.857-1.9190.301-0.5421.251-0.4860.276-3.0720.373-0.542-0.245
03-1.919-4.352-3.072-0.3830.925-2.528-2.5281.836-0.881-4.352-2.5280.482-0.433-4.352-2.5281.192
040.925-2.1780.049-3.072-4.352-2.528-4.352-4.352-1.714-3.072-3.072-4.3522.239-0.9650.703-2.528
052.476-3.072-3.072-2.178-0.542-4.352-4.352-4.3521.107-4.352-4.352-2.528-2.178-4.352-4.352-4.352
06-0.542-1.9191.3072.415-4.352-4.352-4.352-3.072-4.352-4.352-4.352-3.072-3.072-4.352-2.528-2.528
07-1.271-4.352-1.398-2.178-3.072-4.352-2.528-3.072-0.803-4.352-0.4861.002-1.158-1.5431.8931.434
08-3.072-4.3520.017-4.352-3.072-4.352-3.072-1.919-0.087-0.2451.717-1.158-0.125-1.1581.668-0.542
09-0.803-0.731-0.601-0.881-0.486-1.158-2.178-2.5281.2021.3251.402-0.245-1.057-4.352-0.664-1.714
100.44-0.0870.0170.2240.440.08-2.1780.5990.8420.169-0.163-0.125-1.057-1.158-1.543-0.542
11-0.335-0.163-0.6011.298-0.7310.224-1.5430.44-2.528-0.881-3.0720.502-0.731-0.125-0.4860.938
12-0.731-1.714-0.542-0.664-0.087-0.203-3.0720.482-1.158-0.965-1.057-0.9650.440.326-0.1251.723
13-0.163-0.6640.049-0.163-0.163-0.664-2.1780.25-0.245-0.803-1.398-0.9650.7830.3490.2761.161