We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorISX
(GeneCards)
ModelISX_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length16
Quality
D
Motif rank
0
ConsensusbTAATTARnhhWhhdd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words14859
TF familyPaired-related HD factors {3.1.3}
TF subfamilyISX {3.1.3.12}
HGNCHGNC:28084
EntrezGeneGeneID:91464
(SSTAR profile)
UniProt IDISX_HUMAN
UniProt ACQ2M1V0
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.88366
0.0005 6.23091
0.0001 8.77171
GTEx tissue expression atlas ISX expression
ReMap ChIP-seq dataset list ISX datasets
Motifs in JASPAR
PCM
ACGT
011499.145357.8321869.3656415.832
02146.224662.218121.79814211.929
0314824.206105.328107.308105.328
0415141.1790.330.330.33
050.00.00.015142.169
061.321.3246.78215092.747
078628.6095.9426504.3183.301
083563.4171803.29558.689216.863
094187.1275129.2791945.8633879.9
102987.6892531.1782114.9847508.318
114847.3292165.0051355.7526774.084
128069.3541445.043603.0325024.74
137064.1011220.0291034.4295823.611
146788.4841781.501932.6275639.558
155472.5491104.841866.4726698.309
164568.2442007.6262573.865992.44
PWM
ACGT
01-0.9250.347-0.7050.527
02-3.238-1.74-3.4181.322
031.365-3.56-3.542-3.56
041.386-7.233-7.233-7.233
05-7.361-7.361-7.3611.386
06-6.924-6.924-4.3441.383
070.824-6.1180.541-6.498
08-0.06-0.7410.926-2.849
090.1010.304-0.6650.025
10-0.237-0.402-0.5820.685
110.247-0.558-1.0260.582
120.757-0.962-1.8340.283
130.624-1.131-1.2960.431
140.584-0.753-1.3990.398
150.368-1.23-0.7060.57
160.188-0.634-0.3850.459