We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTCF4
(GeneCards)
ModelITF2_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
C
Motif rank
0
ConsensusdSCAGSTGbb
Best auROC (human)0.949
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words499
TF familyE2A-related factors {1.2.1}
TF subfamilySEF2 (E2-2, TCF-4, ITF-2) {1.2.1.0.2}
HGNCHGNC:11634
EntrezGeneGeneID:6925
(SSTAR profile)
UniProt IDITF2_HUMAN
UniProt ACP15884
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.89238
0.0005 5.799665
0.0001 7.429869999999999
GTEx tissue expression atlas TCF4 expression
ReMap ChIP-seq dataset list TCF4 datasets
Motifs in JASPAR
PCM
ACGT
01153.021.0190.0133.0
0263.073.0340.021.0
0314.0445.026.012.0
04466.04.013.014.0
0515.052.0410.020.0
0647.0293.0149.08.0
0745.03.04.0445.0
082.07.0473.015.0
0942.053.0229.0173.0
1046.0136.0263.052.0
PWM
ACGT
010.206-1.7190.420.067
02-0.667-0.5230.999-1.719
03-2.0911.267-1.519-2.228
041.313-3.121-2.157-2.091
05-2.028-0.8541.185-1.764
06-0.9520.8510.18-2.578
07-0.994-3.319-3.1211.267
08-3.567-2.6891.328-2.028
09-1.061-0.8360.6060.328
10-0.9730.0890.743-0.854