We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorJUND
(GeneCards)
ModelJUND_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusnvnvTGAGTCAbn
Best auROC (human)0.997
Best auROC (mouse)0.987
Peak sets in benchmark (human)64
Peak sets in benchmark (mouse)21
Aligned words505
TF familyJun-related factors {1.1.1}
TF subfamilyJun factors {1.1.1.1}
HGNCHGNC:6206
EntrezGeneGeneID:3727
(SSTAR profile)
UniProt IDJUND_HUMAN
UniProt ACP17535
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.84131
0.0005 10.133860000000002
0.0001 15.026164999999999
GTEx tissue expression atlas JUND expression
ReMap ChIP-seq dataset list JUND datasets
Motifs in JASPAR
MA0491.1 (JUND; Homo sapiens)
MA1141.1 (FOS::JUND; Homo sapiens)
MA1142.1 (FOSL1::JUND; Homo sapiens)
MA1144.1 (FOSL2::JUND; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0138.018.072.019.018.032.05.030.040.037.059.021.012.021.064.013.0
0231.017.042.018.034.024.010.040.048.049.072.031.011.016.036.020.0
0354.014.052.04.069.026.09.02.069.044.043.04.032.031.043.03.0
044.02.00.0218.00.01.00.0114.00.00.01.0146.02.00.00.011.0
050.00.06.00.00.00.03.00.00.00.01.00.00.01.0462.026.0
060.00.00.00.01.00.00.00.0462.02.01.07.025.00.00.01.0
070.00.0413.075.00.00.02.00.00.00.01.00.00.00.06.02.0
080.00.00.00.00.00.00.00.06.08.03.0405.01.01.00.075.0
091.05.01.00.01.07.01.00.00.03.00.00.016.0450.014.00.0
1018.00.00.00.0463.01.01.00.012.00.02.02.00.00.00.00.0
1110.0149.096.0238.00.01.00.00.00.02.00.01.00.00.00.02.0
123.05.01.01.050.038.010.054.026.032.018.020.037.070.062.072.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.195-0.5410.83-0.488-0.5410.025-1.768-0.0380.2460.1690.632-0.39-0.936-0.390.713-0.858
02-0.006-0.5970.294-0.5410.085-0.258-1.1120.2460.4270.4470.83-0.006-1.02-0.6560.142-0.437
030.544-0.7860.506-1.9730.787-0.179-1.213-2.5820.7870.3410.318-1.9730.025-0.0060.318-2.232
04-1.973-2.582-4.3981.934-4.398-3.124-4.3981.287-4.398-4.398-3.1241.534-2.582-4.398-4.398-1.02
05-4.398-4.398-1.598-4.398-4.398-4.398-2.232-4.398-4.398-4.398-3.124-4.398-4.398-3.1242.684-0.179
06-4.398-4.398-4.398-4.398-3.124-4.398-4.398-4.3982.684-2.582-3.124-1.452-0.218-4.398-4.398-3.124
07-4.398-4.3982.5720.87-4.398-4.398-2.582-4.398-4.398-4.398-3.124-4.398-4.398-4.398-1.598-2.582
08-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-1.598-1.326-2.2322.552-3.124-3.124-4.3980.87
09-3.124-1.768-3.124-4.398-3.124-1.452-3.124-4.398-4.398-2.232-4.398-4.398-0.6562.658-0.786-4.398
10-0.541-4.398-4.398-4.3982.686-3.124-3.124-4.398-0.936-4.398-2.582-2.582-4.398-4.398-4.398-4.398
11-1.1121.5541.1162.022-4.398-3.124-4.398-4.398-4.398-2.582-4.398-3.124-4.398-4.398-4.398-2.582
12-2.232-1.768-3.124-3.1240.4670.195-1.1120.544-0.1790.025-0.541-0.4370.1690.8020.6810.83