We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorJUND
(GeneCards)
ModelJUND_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusdvTGAGTCAbb
Best auROC (human)0.996
Best auROC (mouse)0.987
Peak sets in benchmark (human)64
Peak sets in benchmark (mouse)21
Aligned words450
TF familyJun-related factors {1.1.1}
TF subfamilyJun factors {1.1.1.1}
HGNCHGNC:6206
EntrezGeneGeneID:3727
(SSTAR profile)
UniProt IDJUND_HUMAN
UniProt ACP17535
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.0975
0.0005 5.26121
0.0001 7.266405
GTEx tissue expression atlas JUND expression
ReMap ChIP-seq dataset list JUND datasets
Motifs in JASPAR
MA0491.1 (JUND; Homo sapiens)
MA1141.1 (FOS::JUND; Homo sapiens)
MA1142.1 (FOSL1::JUND; Homo sapiens)
MA1144.1 (FOSL2::JUND; Homo sapiens)
PCM
ACGT
01106.068.0193.083.0
02179.074.0177.020.0
0312.01.08.0429.0
043.04.0429.014.0
05426.03.010.011.0
0628.00.0422.00.0
076.06.06.0432.0
0811.0420.019.00.0
09445.02.03.00.0
1017.0173.066.0194.0
1168.0186.076.0120.0
PWM
ACGT
01-0.059-0.4950.534-0.299
020.459-0.4120.448-1.667
03-2.132-3.809-2.4821.329
04-3.226-3.0271.329-1.994
051.322-3.226-2.292-2.209
06-1.351-4.3131.312-4.313
07-2.718-2.718-2.7181.336
08-2.2091.307-1.715-4.313
091.365-3.476-3.226-4.313
10-1.8170.426-0.5240.539
11-0.4950.497-0.3860.064