We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorJUN
(GeneCards)
ModelJUN_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusnbnvTGAGTCAYhn
Best auROC (human)0.96
Best auROC (mouse)0.937
Peak sets in benchmark (human)56
Peak sets in benchmark (mouse)39
Aligned words412
TF familyJun-related factors {1.1.1}
TF subfamilyJun factors {1.1.1.1}
HGNCHGNC:6204
EntrezGeneGeneID:3725
(SSTAR profile)
UniProt IDJUN_HUMAN
UniProt ACP05412
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.07076
0.0005 6.66666
0.0001 12.702015
GTEx tissue expression atlas JUN expression
ReMap ChIP-seq dataset list JUN datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0120.018.057.013.016.026.013.030.033.028.052.021.09.011.048.015.0
0225.011.032.010.027.013.011.032.041.036.062.031.010.07.043.019.0
0338.011.050.04.053.05.07.02.075.020.047.06.028.015.044.05.0
040.01.00.0193.00.00.00.051.00.00.00.0148.00.00.00.017.0
050.00.00.00.00.00.01.00.00.00.00.00.00.00.0403.06.0
060.00.00.00.00.00.00.00.0403.00.00.01.06.00.00.00.0
0714.00.0395.00.00.00.00.00.00.00.00.00.00.00.01.00.0
080.00.00.014.00.00.00.00.00.00.00.0396.00.00.00.00.0
090.00.00.00.00.00.00.00.00.00.00.00.02.0408.00.00.0
102.00.00.00.0407.00.01.00.00.00.00.00.00.00.00.00.0
112.0139.041.0227.00.00.00.00.00.00.00.01.00.00.00.00.0
120.02.00.00.028.062.05.044.010.014.08.09.035.0111.044.038.0
1316.019.018.020.067.053.019.050.017.020.011.09.08.024.031.028.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.244-0.3470.791-0.665-0.4620.014-0.6650.1560.250.0870.7-0.196-1.02-0.8270.621-0.525
02-0.024-0.8270.219-0.9190.052-0.665-0.8270.2190.4650.3360.8750.188-0.919-1.260.512-0.294
030.389-0.8270.661-1.7820.719-1.576-1.26-2.3931.064-0.2440.6-1.4060.087-0.5250.535-1.576
04-4.236-2.939-4.2362.007-4.236-4.236-4.2360.681-4.236-4.236-4.2361.742-4.236-4.236-4.236-0.403
05-4.236-4.236-4.236-4.236-4.236-4.236-2.939-4.236-4.236-4.236-4.236-4.236-4.236-4.2362.742-1.406
06-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.2362.742-4.236-4.236-2.939-1.406-4.236-4.236-4.236
07-0.593-4.2362.722-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.236-2.939-4.236
08-4.236-4.236-4.236-0.593-4.236-4.236-4.236-4.236-4.236-4.236-4.2362.724-4.236-4.236-4.236-4.236
09-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.236-2.3932.754-4.236-4.236
10-2.393-4.236-4.236-4.2362.752-4.236-2.939-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.236
11-2.3931.6790.4652.168-4.236-4.236-4.236-4.236-4.236-4.236-4.236-2.939-4.236-4.236-4.236-4.236
12-4.236-2.393-4.236-4.2360.0870.875-1.5760.535-0.919-0.593-1.133-1.020.3081.4550.5350.389
13-0.462-0.294-0.347-0.2440.9520.719-0.2940.661-0.403-0.244-0.827-1.02-1.133-0.0650.1880.087