We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorJUN
(GeneCards)
ModelJUN_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusdvTGAGTCAYh
Best auROC (human)0.954
Best auROC (mouse)0.935
Peak sets in benchmark (human)56
Peak sets in benchmark (mouse)39
Aligned words500
TF familyJun-related factors {1.1.1}
TF subfamilyJun factors {1.1.1.1}
HGNCHGNC:6204
EntrezGeneGeneID:3725
(SSTAR profile)
UniProt IDJUN_HUMAN
UniProt ACP05412
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.92043
0.0005 5.219525000000001
0.0001 7.209595
GTEx tissue expression atlas JUN expression
ReMap ChIP-seq dataset list JUN datasets
Motifs in JASPAR
MA0099.1 (JUN::FOS; Mus musculus)
MA0099.2 (FOS::JUN; Mus musculus/Rattus norvegicus/Homo sapiens)
MA0488.1 (JUN; Homo sapiens)
MA0462.1 (BATF::JUN; Homo sapiens)
MA0099.3 (FOS::JUN; Homo sapiens)
MA1127.1 (FOSB::JUN; Homo sapiens)
MA1128.1 (FOSL1::JUN; Homo sapiens)
MA1130.1 (FOSL2::JUN; Homo sapiens)
MA1132.1 (JUN::JUNB; Homo sapiens)
MA1133.1 (JUN::JUNB(var.2); Homo sapiens)
PCM
ACGT
01116.072.0202.0110.0
02249.081.0154.016.0
038.02.09.0481.0
0412.07.0461.020.0
05489.02.03.06.0
060.00.0474.026.0
073.012.04.0481.0
0812.0478.08.02.0
09488.02.04.06.0
109.0179.059.0253.0
11128.0189.061.0122.0
PWM
ACGT
01-0.074-0.5430.475-0.126
020.683-0.4270.206-1.975
03-2.584-3.573-2.4841.338
04-2.234-2.6941.296-1.77
051.355-3.573-3.325-2.819
06-4.4-4.41.324-1.525
07-3.325-2.234-3.1261.338
08-2.2341.332-2.584-3.573
091.353-3.573-3.126-2.819
10-2.4840.355-0.7370.699
110.0230.409-0.705-0.024