Transcription factor | Zbtb33 | ||||||||
Model | KAISO_MOUSE.H11MO.0.B | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 15 | ||||||||
Quality | B | ||||||||
Motif rank | 0 | ||||||||
Consensus | vdRvbMYCGCGAGAv | ||||||||
Best auROC (human) | 0.9 | ||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | 37 | ||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 498 | ||||||||
TF family | Other factors with up to three adjacent zinc fingers {2.3.2} | ||||||||
TF subfamily | Factors with 2-3 adjacent zinc fingersand a BTB/POZ domain {2.3.2.1} | ||||||||
MGI | MGI:1927290 | ||||||||
EntrezGene | GeneID:56805 (SSTAR profile) | ||||||||
UniProt ID | KAISO_MOUSE | ||||||||
UniProt AC | Q8BN78 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Zbtb33 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 66.0 | 207.0 | 187.0 | 38.0 |
02 | 263.0 | 63.0 | 103.0 | 69.0 |
03 | 253.0 | 51.0 | 185.0 | 9.0 |
04 | 209.0 | 68.0 | 161.0 | 60.0 |
05 | 41.0 | 129.0 | 80.0 | 248.0 |
06 | 144.0 | 295.0 | 47.0 | 12.0 |
07 | 47.0 | 84.0 | 65.0 | 302.0 |
08 | 7.0 | 473.0 | 11.0 | 7.0 |
09 | 23.0 | 4.0 | 463.0 | 8.0 |
10 | 10.0 | 461.0 | 5.0 | 22.0 |
11 | 9.0 | 3.0 | 479.0 | 7.0 |
12 | 402.0 | 13.0 | 77.0 | 6.0 |
13 | 18.0 | 16.0 | 431.0 | 33.0 |
14 | 392.0 | 25.0 | 71.0 | 10.0 |
15 | 167.0 | 102.0 | 165.0 | 64.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.624 | 0.503 | 0.403 | -1.159 |
02 | 0.741 | -0.669 | -0.187 | -0.58 |
03 | 0.703 | -0.875 | 0.392 | -2.48 |
04 | 0.513 | -0.595 | 0.254 | -0.717 |
05 | -1.086 | 0.035 | -0.435 | 0.683 |
06 | 0.144 | 0.856 | -0.954 | -2.23 |
07 | -0.954 | -0.388 | -0.639 | 0.879 |
08 | -2.69 | 1.326 | -2.307 | -2.69 |
09 | -1.636 | -3.122 | 1.304 | -2.58 |
10 | -2.39 | 1.3 | -2.957 | -1.677 |
11 | -2.48 | -3.321 | 1.338 | -2.69 |
12 | 1.164 | -2.159 | -0.473 | -2.815 |
13 | -1.864 | -1.971 | 1.233 | -1.294 |
14 | 1.139 | -1.558 | -0.552 | -2.39 |
15 | 0.291 | -0.197 | 0.279 | -0.654 |