Model info
| Transcription factor | Zbtb33 | ||||||||
| Model | KAISO_MOUSE.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 15 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vdRvbMYCGCGAGAv | ||||||||
| Best auROC (human) | 0.9 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 37 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 498 | ||||||||
| TF family | Other factors with up to three adjacent zinc fingers {2.3.2} | ||||||||
| TF subfamily | Factors with 2-3 adjacent zinc fingersand a BTB/POZ domain {2.3.2.1} | ||||||||
| MGI | MGI:1927290 | ||||||||
| EntrezGene | GeneID:56805 (SSTAR profile) | ||||||||
| UniProt ID | KAISO_MOUSE | ||||||||
| UniProt AC | Q8BN78 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Zbtb33 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 66.0 | 207.0 | 187.0 | 38.0 |
| 02 | 263.0 | 63.0 | 103.0 | 69.0 |
| 03 | 253.0 | 51.0 | 185.0 | 9.0 |
| 04 | 209.0 | 68.0 | 161.0 | 60.0 |
| 05 | 41.0 | 129.0 | 80.0 | 248.0 |
| 06 | 144.0 | 295.0 | 47.0 | 12.0 |
| 07 | 47.0 | 84.0 | 65.0 | 302.0 |
| 08 | 7.0 | 473.0 | 11.0 | 7.0 |
| 09 | 23.0 | 4.0 | 463.0 | 8.0 |
| 10 | 10.0 | 461.0 | 5.0 | 22.0 |
| 11 | 9.0 | 3.0 | 479.0 | 7.0 |
| 12 | 402.0 | 13.0 | 77.0 | 6.0 |
| 13 | 18.0 | 16.0 | 431.0 | 33.0 |
| 14 | 392.0 | 25.0 | 71.0 | 10.0 |
| 15 | 167.0 | 102.0 | 165.0 | 64.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.624 | 0.503 | 0.403 | -1.159 |
| 02 | 0.741 | -0.669 | -0.187 | -0.58 |
| 03 | 0.703 | -0.875 | 0.392 | -2.48 |
| 04 | 0.513 | -0.595 | 0.254 | -0.717 |
| 05 | -1.086 | 0.035 | -0.435 | 0.683 |
| 06 | 0.144 | 0.856 | -0.954 | -2.23 |
| 07 | -0.954 | -0.388 | -0.639 | 0.879 |
| 08 | -2.69 | 1.326 | -2.307 | -2.69 |
| 09 | -1.636 | -3.122 | 1.304 | -2.58 |
| 10 | -2.39 | 1.3 | -2.957 | -1.677 |
| 11 | -2.48 | -3.321 | 1.338 | -2.69 |
| 12 | 1.164 | -2.159 | -0.473 | -2.815 |
| 13 | -1.864 | -1.971 | 1.233 | -1.294 |
| 14 | 1.139 | -1.558 | -0.552 | -2.39 |
| 15 | 0.291 | -0.197 | 0.279 | -0.654 |