We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorKLF12
(GeneCards)
ModelKLF12_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensusvRGGGCGGGGC
Best auROC (human)0.808
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words452
TF familyThree-zinc finger Krüppel-related factors {2.3.1}
TF subfamilyKrüppel-like factors {2.3.1.2}
HGNCHGNC:6346
EntrezGeneGeneID:11278
(SSTAR profile)
UniProt IDKLF12_HUMAN
UniProt ACQ9Y4X4
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.9367799999999997
0.0005 3.12678
0.0001 5.555855
GTEx tissue expression atlas KLF12 expression
ReMap ChIP-seq dataset list KLF12 datasets
Motifs in JASPAR
MA0742.1 (Klf12; Mus musculus)
PCM
ACGT
01171.0155.088.038.0
02112.014.0263.063.0
0329.00.0421.02.0
040.01.0450.01.0
050.00.0452.00.0
0641.0397.01.013.0
0710.01.0434.07.0
082.04.0358.088.0
0944.00.0390.018.0
106.03.0436.07.0
1159.0362.013.018.0
PWM
ACGT
010.410.312-0.246-1.064
02-0.009-1.9980.837-0.574
03-1.322-4.3171.305-3.48
04-4.317-3.8131.372-3.813
05-4.317-4.3171.376-4.317
06-0.9911.247-3.813-2.065
07-2.296-3.8131.336-2.597
08-3.48-3.0311.144-0.246
09-0.922-4.3171.229-1.769
10-2.722-3.231.34-2.597
11-0.6381.155-2.065-1.769