Model info
| Transcription factor | KLF12 (GeneCards) | ||||||||
| Model | KLF12_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vRGGGCGGGGC | ||||||||
| Best auROC (human) | 0.808 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 452 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors {2.3.1.2} | ||||||||
| HGNC | HGNC:6346 | ||||||||
| EntrezGene | GeneID:11278 (SSTAR profile) | ||||||||
| UniProt ID | KLF12_HUMAN | ||||||||
| UniProt AC | Q9Y4X4 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | KLF12 expression | ||||||||
| ReMap ChIP-seq dataset list | KLF12 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 171.0 | 155.0 | 88.0 | 38.0 |
| 02 | 112.0 | 14.0 | 263.0 | 63.0 |
| 03 | 29.0 | 0.0 | 421.0 | 2.0 |
| 04 | 0.0 | 1.0 | 450.0 | 1.0 |
| 05 | 0.0 | 0.0 | 452.0 | 0.0 |
| 06 | 41.0 | 397.0 | 1.0 | 13.0 |
| 07 | 10.0 | 1.0 | 434.0 | 7.0 |
| 08 | 2.0 | 4.0 | 358.0 | 88.0 |
| 09 | 44.0 | 0.0 | 390.0 | 18.0 |
| 10 | 6.0 | 3.0 | 436.0 | 7.0 |
| 11 | 59.0 | 362.0 | 13.0 | 18.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.41 | 0.312 | -0.246 | -1.064 |
| 02 | -0.009 | -1.998 | 0.837 | -0.574 |
| 03 | -1.322 | -4.317 | 1.305 | -3.48 |
| 04 | -4.317 | -3.813 | 1.372 | -3.813 |
| 05 | -4.317 | -4.317 | 1.376 | -4.317 |
| 06 | -0.991 | 1.247 | -3.813 | -2.065 |
| 07 | -2.296 | -3.813 | 1.336 | -2.597 |
| 08 | -3.48 | -3.031 | 1.144 | -0.246 |
| 09 | -0.922 | -4.317 | 1.229 | -1.769 |
| 10 | -2.722 | -3.23 | 1.34 | -2.597 |
| 11 | -0.638 | 1.155 | -2.065 | -1.769 |