Model info
| Transcription factor | KLF13 (GeneCards) | ||||||||
| Model | KLF13_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dRGKGGGCGdn | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 7671 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors {2.3.1.2} | ||||||||
| HGNC | HGNC:13672 | ||||||||
| EntrezGene | GeneID:51621 (SSTAR profile) | ||||||||
| UniProt ID | KLF13_HUMAN | ||||||||
| UniProt AC | Q9Y2Y9 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | KLF13 expression | ||||||||
| ReMap ChIP-seq dataset list | KLF13 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2701.25 | 640.25 | 2396.25 | 1933.25 |
| 02 | 2954.0 | 129.0 | 3309.0 | 1279.0 |
| 03 | 133.25 | 3.25 | 7531.25 | 3.25 |
| 04 | 11.0 | 0.0 | 4170.0 | 3490.0 |
| 05 | 0.0 | 0.0 | 7671.0 | 0.0 |
| 06 | 0.0 | 0.0 | 7671.0 | 0.0 |
| 07 | 0.0 | 0.0 | 7671.0 | 0.0 |
| 08 | 0.0 | 7582.0 | 0.0 | 89.0 |
| 09 | 0.0 | 0.0 | 7671.0 | 0.0 |
| 10 | 1433.0 | 1432.0 | 1670.0 | 3136.0 |
| 11 | 1558.75 | 1496.75 | 3045.75 | 1569.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.342 | -1.095 | 0.223 | 0.008 |
| 02 | 0.432 | -2.683 | 0.545 | -0.404 |
| 03 | -2.651 | -5.858 | 1.367 | -5.858 |
| 04 | -4.977 | -6.755 | 0.776 | 0.598 |
| 05 | -6.755 | -6.755 | 1.385 | -6.755 |
| 06 | -6.755 | -6.755 | 1.385 | -6.755 |
| 07 | -6.755 | -6.755 | 1.385 | -6.755 |
| 08 | -6.755 | 1.374 | -6.755 | -3.047 |
| 09 | -6.755 | -6.755 | 1.385 | -6.755 |
| 10 | -0.291 | -0.292 | -0.138 | 0.491 |
| 11 | -0.207 | -0.248 | 0.462 | -0.2 |