We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorKLF13
(GeneCards)
ModelKLF13_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusdRGKGGGCGdn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7671
TF familyThree-zinc finger Krüppel-related factors {2.3.1}
TF subfamilyKrüppel-like factors {2.3.1.2}
HGNCHGNC:13672
EntrezGeneGeneID:51621
(SSTAR profile)
UniProt IDKLF13_HUMAN
UniProt ACQ9Y2Y9
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -1.41253
0.0005 1.00677
0.0001 4.08962
GTEx tissue expression atlas KLF13 expression
ReMap ChIP-seq dataset list KLF13 datasets
Motifs in JASPAR
PCM
ACGT
012701.25640.252396.251933.25
022954.0129.03309.01279.0
03133.253.257531.253.25
0411.00.04170.03490.0
050.00.07671.00.0
060.00.07671.00.0
070.00.07671.00.0
080.07582.00.089.0
090.00.07671.00.0
101433.01432.01670.03136.0
111558.751496.753045.751569.75
PWM
ACGT
010.342-1.0950.2230.008
020.432-2.6830.545-0.404
03-2.651-5.8581.367-5.858
04-4.977-6.7550.7760.598
05-6.755-6.7551.385-6.755
06-6.755-6.7551.385-6.755
07-6.755-6.7551.385-6.755
08-6.7551.374-6.755-3.047
09-6.755-6.7551.385-6.755
10-0.291-0.292-0.1380.491
11-0.207-0.2480.462-0.2