We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorKLF1
(GeneCards)
ModelKLF1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusndGGGYGKGGMnKSKnvbb
Best auROC (human)0.915
Best auROC (mouse)0.988
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)6
Aligned words585
TF familyThree-zinc finger Krüppel-related factors {2.3.1}
TF subfamilyKrüppel-like factors {2.3.1.2}
HGNCHGNC:6345
EntrezGeneGeneID:10661
(SSTAR profile)
UniProt IDKLF1_HUMAN
UniProt ACQ13351
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.22276
0.0005 6.598310000000001
0.0001 11.53706
GTEx tissue expression atlas KLF1 expression
ReMap ChIP-seq dataset list KLF1 datasets
Motifs in JASPAR
MA0493.1 (Klf1; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0144.07.040.022.066.06.024.057.068.09.035.054.024.01.033.010.0
023.00.0172.027.00.00.023.00.03.01.0126.02.00.00.0141.02.0
030.00.06.00.00.00.01.00.00.03.0459.00.00.06.025.00.0
040.00.00.00.00.00.09.00.02.00.0489.00.00.00.00.00.0
051.00.00.01.00.00.00.00.068.0245.00.0185.00.00.00.00.0
0619.00.050.00.00.02.0239.04.00.00.00.00.05.00.0178.03.0
072.01.03.018.00.02.00.00.02.07.0244.0214.00.00.06.01.0
081.00.03.00.00.00.08.02.044.01.0190.018.02.01.0219.011.0
091.00.044.02.00.00.02.00.016.03.0378.023.01.01.028.01.0
106.010.00.02.00.03.01.00.061.0278.053.060.01.018.05.02.0
1135.012.015.06.062.0125.024.098.015.015.07.022.03.022.024.015.0
125.05.065.040.032.024.064.054.03.05.051.011.04.07.098.032.0
133.06.031.04.07.06.016.012.018.038.0183.039.03.025.095.014.0
143.03.024.01.014.015.025.021.022.020.0242.041.04.012.048.05.0
156.06.026.05.014.013.06.017.083.075.0128.053.012.011.033.012.0
1650.016.040.09.016.016.057.016.019.050.080.044.07.013.061.06.0
1716.06.028.042.015.019.039.022.027.035.0106.070.02.09.054.010.0
1814.015.026.05.020.011.023.015.026.053.098.050.010.029.092.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.339-1.4540.244-0.3460.741-1.6-0.260.5950.771-1.2150.1120.542-0.26-3.1260.054-1.114
02-2.234-4.41.695-0.144-4.4-4.4-0.302-4.4-2.234-3.1261.385-2.584-4.4-4.41.497-2.584
03-4.4-4.4-1.6-4.4-4.4-4.4-3.126-4.4-4.4-2.2342.676-4.4-4.4-1.6-0.22-4.4
04-4.4-4.4-4.4-4.4-4.4-4.4-1.215-4.4-2.584-4.42.739-4.4-4.4-4.4-4.4-4.4
05-3.126-4.4-4.4-3.126-4.4-4.4-4.4-4.40.7712.048-4.41.768-4.4-4.4-4.4-4.4
06-0.49-4.40.465-4.4-4.4-2.5842.024-1.975-4.4-4.4-4.4-4.4-1.77-4.41.73-2.234
07-2.584-3.126-2.234-0.543-4.4-2.584-4.4-4.4-2.584-1.4542.0441.913-4.4-4.4-1.6-3.126
08-3.126-4.4-2.234-4.4-4.4-4.4-1.328-2.5840.339-3.1261.795-0.543-2.584-3.1261.936-1.022
09-3.126-4.40.339-2.584-4.4-4.4-2.584-4.4-0.658-2.2342.482-0.302-3.126-3.126-0.108-3.126
10-1.6-1.114-4.4-2.584-4.4-2.234-3.126-4.40.6632.1750.5230.646-3.126-0.543-1.77-2.584
110.112-0.938-0.721-1.60.6791.377-0.261.135-0.721-0.721-1.454-0.346-2.234-0.346-0.26-0.721
12-1.77-1.770.7260.2440.023-0.260.7110.542-2.234-1.770.485-1.022-1.975-1.4541.1350.023
13-2.234-1.6-0.008-1.975-1.454-1.6-0.658-0.938-0.5430.1931.7570.219-2.234-0.221.104-0.788
14-2.234-2.234-0.26-3.126-0.788-0.721-0.22-0.392-0.346-0.4392.0360.269-1.975-0.9380.425-1.77
15-1.6-1.6-0.181-1.77-0.788-0.86-1.6-0.5990.9690.8681.4010.523-0.938-1.0220.054-0.938
160.465-0.6580.244-1.215-0.658-0.6580.595-0.658-0.490.4650.9320.339-1.454-0.860.663-1.6
17-0.658-1.6-0.1080.293-0.721-0.490.219-0.346-0.1440.1121.2130.8-2.584-1.2150.542-1.114
18-0.788-0.721-0.181-1.77-0.439-1.022-0.302-0.721-0.1810.5231.1350.465-1.114-0.0741.072-0.86