Transcription factor | KLF3 (GeneCards) | ||||||||
Model | KLF3_HUMAN.H11DI.0.B | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 17 | ||||||||
Quality | B | ||||||||
Motif rank | 0 | ||||||||
Consensus | nvnvndGGGYGKGGYhn | ||||||||
Best auROC (human) | 0.783 | ||||||||
Best auROC (mouse) | 0.996 | ||||||||
Peak sets in benchmark (human) | 2 | ||||||||
Peak sets in benchmark (mouse) | 7 | ||||||||
Aligned words | 501 | ||||||||
TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
TF subfamily | Krüppel-like factors {2.3.1.2} | ||||||||
HGNC | HGNC:16516 | ||||||||
EntrezGene | GeneID:51274 (SSTAR profile) | ||||||||
UniProt ID | KLF3_HUMAN | ||||||||
UniProt AC | P57682 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | KLF3 expression | ||||||||
ReMap ChIP-seq dataset list | KLF3 datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 26.0 | 21.0 | 73.0 | 11.0 | 39.0 | 17.0 | 37.0 | 22.0 | 22.0 | 30.0 | 80.0 | 21.0 | 12.0 | 12.0 | 55.0 | 22.0 |
02 | 29.0 | 8.0 | 39.0 | 23.0 | 16.0 | 25.0 | 16.0 | 23.0 | 49.0 | 51.0 | 97.0 | 48.0 | 11.0 | 24.0 | 26.0 | 15.0 |
03 | 39.0 | 13.0 | 47.0 | 6.0 | 32.0 | 29.0 | 27.0 | 20.0 | 52.0 | 28.0 | 80.0 | 18.0 | 16.0 | 21.0 | 49.0 | 23.0 |
04 | 51.0 | 31.0 | 45.0 | 12.0 | 29.0 | 25.0 | 11.0 | 26.0 | 74.0 | 62.0 | 43.0 | 24.0 | 6.0 | 21.0 | 26.0 | 14.0 |
05 | 63.0 | 5.0 | 53.0 | 39.0 | 54.0 | 11.0 | 13.0 | 61.0 | 43.0 | 5.0 | 26.0 | 51.0 | 27.0 | 2.0 | 22.0 | 25.0 |
06 | 13.0 | 1.0 | 173.0 | 0.0 | 2.0 | 0.0 | 21.0 | 0.0 | 4.0 | 0.0 | 110.0 | 0.0 | 6.0 | 0.0 | 170.0 | 0.0 |
07 | 0.0 | 0.0 | 24.0 | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 | 6.0 | 0.0 | 464.0 | 4.0 | 0.0 | 0.0 | 0.0 | 0.0 |
08 | 1.0 | 1.0 | 2.0 | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 | 9.0 | 1.0 | 479.0 | 0.0 | 0.0 | 0.0 | 5.0 | 0.0 |
09 | 2.0 | 3.0 | 0.0 | 5.0 | 0.0 | 1.0 | 0.0 | 1.0 | 39.0 | 215.0 | 1.0 | 231.0 | 2.0 | 0.0 | 0.0 | 0.0 |
10 | 0.0 | 0.0 | 42.0 | 1.0 | 5.0 | 0.0 | 213.0 | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 | 3.0 | 0.0 | 234.0 | 0.0 |
11 | 3.0 | 0.0 | 5.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 10.0 | 3.0 | 270.0 | 207.0 | 0.0 | 0.0 | 2.0 | 0.0 |
12 | 1.0 | 2.0 | 9.0 | 1.0 | 0.0 | 0.0 | 2.0 | 1.0 | 27.0 | 4.0 | 227.0 | 19.0 | 7.0 | 5.0 | 191.0 | 4.0 |
13 | 4.0 | 1.0 | 24.0 | 6.0 | 1.0 | 0.0 | 10.0 | 0.0 | 36.0 | 6.0 | 350.0 | 37.0 | 2.0 | 0.0 | 22.0 | 1.0 |
14 | 8.0 | 23.0 | 6.0 | 6.0 | 0.0 | 6.0 | 0.0 | 1.0 | 38.0 | 245.0 | 30.0 | 93.0 | 5.0 | 29.0 | 3.0 | 7.0 |
15 | 14.0 | 20.0 | 12.0 | 5.0 | 57.0 | 113.0 | 25.0 | 108.0 | 7.0 | 18.0 | 5.0 | 9.0 | 19.0 | 37.0 | 24.0 | 27.0 |
16 | 4.0 | 15.0 | 61.0 | 17.0 | 49.0 | 38.0 | 46.0 | 55.0 | 16.0 | 11.0 | 25.0 | 14.0 | 24.0 | 38.0 | 52.0 | 35.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -0.181 | -0.392 | 0.841 | -1.022 | 0.219 | -0.599 | 0.167 | -0.346 | -0.346 | -0.04 | 0.932 | -0.392 | -0.938 | -0.938 | 0.56 | -0.346 |
02 | -0.074 | -1.328 | 0.219 | -0.302 | -0.658 | -0.22 | -0.658 | -0.302 | 0.445 | 0.485 | 1.124 | 0.425 | -1.022 | -0.26 | -0.181 | -0.721 |
03 | 0.219 | -0.86 | 0.404 | -1.6 | 0.023 | -0.074 | -0.144 | -0.439 | 0.504 | -0.108 | 0.932 | -0.543 | -0.658 | -0.392 | 0.445 | -0.302 |
04 | 0.485 | -0.008 | 0.361 | -0.938 | -0.074 | -0.22 | -1.022 | -0.181 | 0.855 | 0.679 | 0.316 | -0.26 | -1.6 | -0.392 | -0.181 | -0.788 |
05 | 0.695 | -1.77 | 0.523 | 0.219 | 0.542 | -1.022 | -0.86 | 0.663 | 0.316 | -1.77 | -0.181 | 0.485 | -0.144 | -2.584 | -0.346 | -0.22 |
06 | -0.86 | -3.126 | 1.701 | -4.4 | -2.584 | -4.4 | -0.392 | -4.4 | -1.975 | -4.4 | 1.25 | -4.4 | -1.6 | -4.4 | 1.684 | -4.4 |
07 | -4.4 | -4.4 | -0.26 | -3.126 | -4.4 | -4.4 | -3.126 | -4.4 | -1.6 | -4.4 | 2.686 | -1.975 | -4.4 | -4.4 | -4.4 | -4.4 |
08 | -3.126 | -3.126 | -2.584 | -2.584 | -4.4 | -4.4 | -4.4 | -4.4 | -1.215 | -3.126 | 2.718 | -4.4 | -4.4 | -4.4 | -1.77 | -4.4 |
09 | -2.584 | -2.234 | -4.4 | -1.77 | -4.4 | -3.126 | -4.4 | -3.126 | 0.219 | 1.918 | -3.126 | 1.99 | -2.584 | -4.4 | -4.4 | -4.4 |
10 | -4.4 | -4.4 | 0.293 | -3.126 | -1.77 | -4.4 | 1.909 | -3.126 | -4.4 | -4.4 | -3.126 | -4.4 | -2.234 | -4.4 | 2.003 | -4.4 |
11 | -2.234 | -4.4 | -1.77 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -1.114 | -2.234 | 2.145 | 1.88 | -4.4 | -4.4 | -2.584 | -4.4 |
12 | -3.126 | -2.584 | -1.215 | -3.126 | -4.4 | -4.4 | -2.584 | -3.126 | -0.144 | -1.975 | 1.972 | -0.49 | -1.454 | -1.77 | 1.8 | -1.975 |
13 | -1.975 | -3.126 | -0.26 | -1.6 | -3.126 | -4.4 | -1.114 | -4.4 | 0.14 | -1.6 | 2.405 | 0.167 | -2.584 | -4.4 | -0.346 | -3.126 |
14 | -1.328 | -0.302 | -1.6 | -1.6 | -4.4 | -1.6 | -4.4 | -3.126 | 0.193 | 2.048 | -0.04 | 1.082 | -1.77 | -0.074 | -2.234 | -1.454 |
15 | -0.788 | -0.439 | -0.938 | -1.77 | 0.595 | 1.276 | -0.22 | 1.231 | -1.454 | -0.543 | -1.77 | -1.215 | -0.49 | 0.167 | -0.26 | -0.144 |
16 | -1.975 | -0.721 | 0.663 | -0.599 | 0.445 | 0.193 | 0.383 | 0.56 | -0.658 | -1.022 | -0.22 | -0.788 | -0.26 | 0.193 | 0.504 | 0.112 |