Model info
| Transcription factor | Klf3 | ||||||||
| Model | KLF3_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 19 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvvvvdGGGYGGRGbhbbv | ||||||||
| Best auROC (human) | 0.76 | ||||||||
| Best auROC (mouse) | 0.992 | ||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | 7 | ||||||||
| Aligned words | 498 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors {2.3.1.2} | ||||||||
| MGI | MGI:1342773 | ||||||||
| EntrezGene | GeneID:16599 (SSTAR profile) | ||||||||
| UniProt ID | KLF3_MOUSE | ||||||||
| UniProt AC | Q60980 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Klf3 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 106.0 | 94.0 | 235.0 | 63.0 |
| 02 | 113.0 | 111.0 | 230.0 | 44.0 |
| 03 | 129.0 | 102.0 | 211.0 | 56.0 |
| 04 | 122.0 | 93.0 | 247.0 | 36.0 |
| 05 | 163.0 | 123.0 | 157.0 | 55.0 |
| 06 | 172.0 | 22.0 | 179.0 | 125.0 |
| 07 | 17.0 | 0.0 | 481.0 | 0.0 |
| 08 | 3.0 | 0.0 | 494.0 | 1.0 |
| 09 | 2.0 | 4.0 | 491.0 | 1.0 |
| 10 | 43.0 | 320.0 | 0.0 | 135.0 |
| 11 | 4.0 | 3.0 | 489.0 | 2.0 |
| 12 | 2.0 | 13.0 | 361.0 | 122.0 |
| 13 | 92.0 | 9.0 | 376.0 | 21.0 |
| 14 | 38.0 | 5.0 | 420.0 | 35.0 |
| 15 | 42.0 | 308.0 | 74.0 | 74.0 |
| 16 | 91.0 | 190.0 | 81.0 | 136.0 |
| 17 | 65.0 | 102.0 | 247.0 | 84.0 |
| 18 | 46.0 | 121.0 | 264.0 | 67.0 |
| 19 | 80.0 | 109.0 | 240.0 | 69.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.159 | -0.277 | 0.629 | -0.669 |
| 02 | -0.096 | -0.113 | 0.608 | -1.018 |
| 03 | 0.035 | -0.197 | 0.522 | -0.784 |
| 04 | -0.02 | -0.288 | 0.679 | -1.211 |
| 05 | 0.267 | -0.012 | 0.229 | -0.802 |
| 06 | 0.32 | -1.677 | 0.359 | 0.004 |
| 07 | -1.916 | -4.397 | 1.342 | -4.397 |
| 08 | -3.321 | -4.397 | 1.369 | -3.9 |
| 09 | -3.569 | -3.122 | 1.363 | -3.9 |
| 10 | -1.04 | 0.936 | -4.397 | 0.08 |
| 11 | -3.122 | -3.321 | 1.359 | -3.569 |
| 12 | -3.569 | -2.159 | 1.056 | -0.02 |
| 13 | -0.298 | -2.48 | 1.097 | -1.721 |
| 14 | -1.159 | -2.957 | 1.207 | -1.238 |
| 15 | -1.063 | 0.898 | -0.512 | -0.512 |
| 16 | -0.309 | 0.418 | -0.423 | 0.087 |
| 17 | -0.639 | -0.197 | 0.679 | -0.388 |
| 18 | -0.975 | -0.028 | 0.745 | -0.609 |
| 19 | -0.435 | -0.131 | 0.65 | -0.58 |