We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorKLF4
(GeneCards)
ModelKLF4_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusnvddbndGGGYGKGGYhvn
Best auROC (human)0.904
Best auROC (mouse)0.987
Peak sets in benchmark (human)11
Peak sets in benchmark (mouse)34
Aligned words455
TF familyThree-zinc finger Krüppel-related factors {2.3.1}
TF subfamilyKrüppel-like factors {2.3.1.2}
HGNCHGNC:6348
EntrezGeneGeneID:9314
(SSTAR profile)
UniProt IDKLF4_HUMAN
UniProt ACO43474
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.13776
0.0005 7.565060000000001
0.0001 12.66491
GTEx tissue expression atlas KLF4 expression
ReMap ChIP-seq dataset list KLF4 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0141.014.043.018.025.012.020.022.063.022.073.022.010.028.029.012.0
0225.010.083.021.027.020.011.018.032.038.067.028.09.014.033.018.0
0326.07.045.015.018.016.034.014.070.023.083.018.013.015.041.016.0
0420.09.047.051.014.020.015.012.020.045.0102.036.06.013.033.011.0
0519.06.023.012.027.032.07.021.060.077.044.016.040.018.020.032.0
0678.03.042.023.040.013.022.058.032.011.09.042.031.03.021.026.0
0720.00.0152.09.03.00.027.00.05.00.088.01.04.00.0144.01.0
080.00.032.00.00.00.00.00.00.01.0410.00.00.00.011.00.0
090.00.00.00.01.00.00.00.02.00.0450.01.00.00.00.00.0
100.02.01.00.00.00.00.00.052.096.00.0302.00.00.00.01.0
116.00.045.01.00.01.095.02.00.00.01.00.01.01.0301.00.0
120.00.02.05.00.00.00.02.01.012.0260.0169.00.00.00.03.0
130.00.01.00.00.00.012.00.035.01.0223.03.03.00.0174.02.0
140.00.036.02.00.00.01.00.013.05.0371.021.00.00.04.01.0
150.08.05.00.00.04.00.01.044.0254.027.087.00.015.05.04.0
1623.014.05.02.062.0125.021.073.02.010.016.09.06.035.026.025.0
177.011.056.019.043.060.060.021.015.015.034.04.07.031.058.013.0
186.021.034.011.044.026.020.027.021.063.066.058.05.08.031.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.364-0.6930.411-0.448-0.125-0.843-0.344-0.2510.79-0.2510.937-0.251-1.019-0.0130.022-0.843
02-0.125-1.0191.065-0.296-0.049-0.344-0.927-0.4480.1190.2890.851-0.013-1.12-0.6930.149-0.448
03-0.086-1.360.456-0.626-0.448-0.5630.179-0.6930.895-0.2071.065-0.448-0.765-0.6260.364-0.563
04-0.344-1.120.4990.58-0.693-0.344-0.626-0.843-0.3440.4561.270.235-1.505-0.7650.149-0.927
05-0.395-1.505-0.207-0.843-0.0490.119-1.36-0.2960.7420.990.434-0.5630.339-0.448-0.3440.119
061.003-2.140.388-0.2070.339-0.765-0.2510.7080.119-0.927-1.120.3880.087-2.14-0.296-0.086
07-0.344-4.321.667-1.12-2.14-4.32-0.049-4.32-1.676-4.321.123-3.035-1.881-4.321.614-3.035
08-4.32-4.320.119-4.32-4.32-4.32-4.32-4.32-4.32-3.0352.658-4.32-4.32-4.32-0.927-4.32
09-4.32-4.32-4.32-4.32-3.035-4.32-4.32-4.32-2.491-4.322.751-3.035-4.32-4.32-4.32-4.32
10-4.32-2.491-3.035-4.32-4.32-4.32-4.32-4.320.61.209-4.322.353-4.32-4.32-4.32-3.035
11-1.505-4.320.456-3.035-4.32-3.0351.199-2.491-4.32-4.32-3.035-4.32-3.035-3.0352.349-4.32
12-4.32-4.32-2.491-1.676-4.32-4.32-4.32-2.491-3.035-0.8432.2031.773-4.32-4.32-4.32-2.14
13-4.32-4.32-3.035-4.32-4.32-4.32-0.843-4.320.207-3.0352.05-2.14-2.14-4.321.802-2.491
14-4.32-4.320.235-2.491-4.32-4.32-3.035-4.32-0.765-1.6762.558-0.296-4.32-4.32-1.881-3.035
15-4.32-1.233-1.676-4.32-4.32-1.881-4.32-3.0350.4342.18-0.0491.111-4.32-0.626-1.676-1.881
16-0.207-0.693-1.676-2.4910.7741.472-0.2960.937-2.491-1.019-0.563-1.12-1.5050.207-0.086-0.125
17-1.36-0.9270.673-0.3950.4110.7420.742-0.296-0.626-0.6260.179-1.881-1.360.0870.708-0.765
18-1.505-0.2960.179-0.9270.434-0.086-0.344-0.049-0.2960.790.8370.708-1.676-1.2330.087-0.765