We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorKlf4
ModelKLF4_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusvdvdvdGGGYGKGGbnbvbv
Best auROC (human)0.889
Best auROC (mouse)0.986
Peak sets in benchmark (human)11
Peak sets in benchmark (mouse)34
Aligned words501
TF familyThree-zinc finger Krüppel-related factors {2.3.1}
TF subfamilyKrüppel-like factors {2.3.1.2}
MGIMGI:1342287
EntrezGeneGeneID:16600
(SSTAR profile)
UniProt IDKLF4_MOUSE
UniProt ACQ60793
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.875959999999999
0.0005 7.14926
0.0001 11.884360000000001
GTEx tissue expression atlas Klf4 expression
Motifs in JASPAR
MA0039.1 (Klf4; Mus musculus)
MA0039.2 (Klf4; Mus musculus)
MA0039.3 (KLF4; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0128.06.043.020.033.014.033.025.033.034.0119.029.017.018.034.013.0
0230.018.045.018.017.014.033.08.041.050.0113.025.021.013.040.013.0
0330.011.056.012.024.014.034.023.041.042.0123.025.015.02.037.010.0
0433.027.037.013.019.020.023.07.047.088.086.029.011.021.033.05.0
0539.02.032.037.060.07.019.070.053.014.077.035.014.02.024.014.0
065.01.0159.01.00.00.025.00.05.01.0146.00.04.00.0152.00.0
070.00.014.00.00.00.02.00.05.00.0473.04.00.00.01.00.0
081.02.02.00.00.00.00.00.07.05.0477.01.00.00.04.00.0
094.01.01.02.01.02.00.04.066.0161.01.0255.00.01.00.00.0
101.00.069.01.02.02.0159.02.00.01.01.00.00.02.0252.07.0
110.00.03.00.00.00.02.03.09.06.0326.0140.01.00.06.03.0
120.01.09.00.00.00.06.00.012.07.0312.06.03.03.0139.01.0
130.00.014.01.00.01.09.01.016.02.0427.021.01.00.06.00.0
140.08.04.05.00.03.00.00.044.0246.042.0124.02.018.01.02.0
157.011.018.010.043.095.074.063.017.014.08.08.09.040.062.020.0
1613.011.044.08.018.048.056.038.024.012.0113.013.018.013.054.016.0
1712.016.035.010.022.030.013.019.034.066.0152.015.04.016.034.021.0
187.06.050.09.028.030.043.027.022.033.0157.022.07.04.042.012.0
199.019.027.09.018.021.021.013.060.075.0123.034.012.011.028.019.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.106-1.5980.318-0.4370.056-0.7860.056-0.2180.0560.0851.33-0.072-0.597-0.5410.085-0.858
02-0.038-0.5410.363-0.541-0.597-0.7860.056-1.3260.2710.4671.278-0.218-0.39-0.8580.246-0.858
03-0.038-1.020.58-0.936-0.258-0.7860.085-0.30.2710.2941.363-0.218-0.719-2.5820.169-1.112
040.056-0.1420.169-0.858-0.488-0.437-0.3-1.4520.4061.0291.006-0.072-1.02-0.390.056-1.768
050.221-2.5820.0250.1690.648-1.452-0.4880.8020.525-0.7860.8960.114-0.786-2.582-0.258-0.786
06-1.768-3.1241.619-3.124-4.398-4.398-0.218-4.398-1.768-3.1241.534-4.398-1.973-4.3981.574-4.398
07-4.398-4.398-0.786-4.398-4.398-4.398-2.582-4.398-1.768-4.3982.708-1.973-4.398-4.398-3.124-4.398
08-3.124-2.582-2.582-4.398-4.398-4.398-4.398-4.398-1.452-1.7682.716-3.124-4.398-4.398-1.973-4.398
09-1.973-3.124-3.124-2.582-3.124-2.582-4.398-1.9730.7431.631-3.1242.09-4.398-3.124-4.398-4.398
10-3.124-4.3980.787-3.124-2.582-2.5821.619-2.582-4.398-3.124-3.124-4.398-4.398-2.5822.079-1.452
11-4.398-4.398-2.232-4.398-4.398-4.398-2.582-2.232-1.213-1.5982.3361.492-3.124-4.398-1.598-2.232
12-4.398-3.124-1.213-4.398-4.398-4.398-1.598-4.398-0.936-1.4522.292-1.598-2.232-2.2321.485-3.124
13-4.398-4.398-0.786-3.124-4.398-3.124-1.213-3.124-0.656-2.5822.605-0.39-3.124-4.398-1.598-4.398
14-4.398-1.326-1.973-1.768-4.398-2.232-4.398-4.3980.3412.0550.2941.371-2.582-0.541-3.124-2.582
15-1.452-1.02-0.541-1.1120.3181.1060.8570.697-0.597-0.786-1.326-1.326-1.2130.2460.681-0.437
16-0.858-1.020.341-1.326-0.5410.4270.580.195-0.258-0.9361.278-0.858-0.541-0.8580.544-0.656
17-0.936-0.6560.114-1.112-0.344-0.038-0.858-0.4880.0850.7431.574-0.719-1.973-0.6560.085-0.39
18-1.452-1.5980.467-1.213-0.106-0.0380.318-0.142-0.3440.0561.606-0.344-1.452-1.9730.294-0.936
19-1.213-0.488-0.142-1.213-0.541-0.39-0.39-0.8580.6480.871.3630.085-0.936-1.02-0.106-0.488