Transcription factor | Klf4 | ||||||||
Model | KLF4_MOUSE.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 15 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | dvvdvWGGGYGKGKM | ||||||||
Best auROC (human) | 0.909 | ||||||||
Best auROC (mouse) | 0.975 | ||||||||
Peak sets in benchmark (human) | 11 | ||||||||
Peak sets in benchmark (mouse) | 34 | ||||||||
Aligned words | 500 | ||||||||
TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
TF subfamily | Krüppel-like factors {2.3.1.2} | ||||||||
MGI | MGI:1342287 | ||||||||
EntrezGene | GeneID:16600 (SSTAR profile) | ||||||||
UniProt ID | KLF4_MOUSE | ||||||||
UniProt AC | Q60793 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Klf4 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 85.0 | 72.0 | 171.0 | 172.0 |
02 | 131.0 | 92.0 | 235.0 | 42.0 |
03 | 143.0 | 103.0 | 210.0 | 44.0 |
04 | 231.0 | 60.0 | 146.0 | 63.0 |
05 | 128.0 | 118.0 | 235.0 | 19.0 |
06 | 171.0 | 9.0 | 79.0 | 241.0 |
07 | 53.0 | 2.0 | 443.0 | 2.0 |
08 | 14.0 | 0.0 | 446.0 | 40.0 |
09 | 29.0 | 22.0 | 442.0 | 7.0 |
10 | 58.0 | 116.0 | 8.0 | 318.0 |
11 | 48.0 | 5.0 | 439.0 | 8.0 |
12 | 11.0 | 3.0 | 217.0 | 269.0 |
13 | 37.0 | 4.0 | 408.0 | 51.0 |
14 | 32.0 | 20.0 | 361.0 | 87.0 |
15 | 75.0 | 341.0 | 35.0 | 49.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.38 | -0.543 | 0.31 | 0.316 |
02 | 0.046 | -0.302 | 0.626 | -1.067 |
03 | 0.133 | -0.191 | 0.514 | -1.022 |
04 | 0.608 | -0.721 | 0.154 | -0.673 |
05 | 0.023 | -0.057 | 0.626 | -1.818 |
06 | 0.31 | -2.484 | -0.452 | 0.651 |
07 | -0.841 | -3.573 | 1.256 | -3.573 |
08 | -2.096 | -4.4 | 1.263 | -1.114 |
09 | -1.421 | -1.681 | 1.254 | -2.694 |
10 | -0.754 | -0.074 | -2.584 | 0.926 |
11 | -0.938 | -2.961 | 1.247 | -2.584 |
12 | -2.311 | -3.325 | 0.546 | 0.76 |
13 | -1.189 | -3.126 | 1.174 | -0.879 |
14 | -1.328 | -1.77 | 1.053 | -0.357 |
15 | -0.503 | 0.996 | -1.242 | -0.918 |