We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorKLF5
(GeneCards)
ModelKLF5_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusndGGGYGKGKYnvddn
Best auROC (human)0.973
Best auROC (mouse)0.978
Peak sets in benchmark (human)32
Peak sets in benchmark (mouse)23
Aligned words514
TF familyThree-zinc finger Krüppel-related factors {2.3.1}
TF subfamilyKrüppel-like factors {2.3.1.2}
HGNCHGNC:6349
EntrezGeneGeneID:688
(SSTAR profile)
UniProt IDKLF5_HUMAN
UniProt ACQ13887
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.554810000000001
0.0005 9.44091
0.0001 13.415960000000002
GTEx tissue expression atlas KLF5 expression
ReMap ChIP-seq dataset list KLF5 datasets
Motifs in JASPAR
MA0599.1 (KLF5; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0138.09.036.024.067.015.022.063.066.017.019.040.021.07.019.025.0
0216.02.0172.02.019.00.022.07.013.00.079.04.017.02.0131.02.0
033.00.061.01.00.00.03.01.04.07.0382.011.02.03.07.03.0
041.00.07.01.01.01.06.02.07.05.0435.06.00.03.012.01.0
051.04.01.03.00.00.00.09.047.0134.03.0276.02.03.02.03.0
065.00.044.01.01.04.0126.010.00.01.04.01.05.03.0278.05.0
071.00.04.06.01.00.01.06.025.07.0176.0244.01.00.011.05.0
081.01.024.02.00.00.06.01.04.03.0180.05.05.05.0245.06.0
091.00.07.02.01.03.04.01.010.011.0353.081.00.00.011.03.0
100.09.01.02.03.011.00.00.038.0252.034.051.06.054.020.07.0
1116.012.013.06.0116.065.033.0112.018.04.07.026.013.015.019.013.0
1213.021.0105.024.032.021.027.016.010.019.039.04.010.026.0101.020.0
1311.08.037.09.032.012.011.032.051.038.0125.058.06.014.026.018.0
1420.07.062.011.018.010.026.018.050.019.0115.015.013.017.074.013.0
1530.027.034.010.024.017.03.09.054.078.095.050.09.017.027.04.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.217-1.1910.164-0.2360.78-0.697-0.3220.7190.765-0.575-0.4660.268-0.368-1.431-0.466-0.196
02-0.634-2.561.719-2.56-0.466-4.38-0.322-1.431-0.836-4.380.944-1.952-0.575-2.561.448-2.56
03-2.21-4.380.687-3.103-4.38-4.38-2.21-3.103-1.952-1.4312.516-0.998-2.56-2.21-1.431-2.21
04-3.103-4.38-1.431-3.103-3.103-3.103-1.576-2.56-1.431-1.7462.646-1.576-4.38-2.21-0.914-3.103
05-3.103-1.952-3.103-2.21-4.38-4.38-4.38-1.1910.4281.47-2.212.191-2.56-2.21-2.56-2.21
06-1.746-4.380.363-3.103-3.103-1.9521.409-1.09-4.38-3.103-1.952-3.103-1.746-2.212.199-1.746
07-3.103-4.38-1.952-1.576-3.103-4.38-3.103-1.576-0.196-1.4311.7422.068-3.103-4.38-0.998-1.746
08-3.103-3.103-0.236-2.56-4.38-4.38-1.576-3.103-1.952-2.211.765-1.746-1.746-1.7462.073-1.576
09-3.103-4.38-1.431-2.56-3.103-2.21-1.952-3.103-1.09-0.9982.4370.969-4.38-4.38-0.998-2.21
10-4.38-1.191-3.103-2.56-2.21-0.998-4.38-4.380.2172.1010.1070.509-1.5760.566-0.415-1.431
11-0.634-0.914-0.836-1.5761.3270.750.0781.292-0.519-1.952-1.431-0.157-0.836-0.697-0.466-0.836
12-0.836-0.3681.227-0.2360.047-0.368-0.12-0.634-1.09-0.4660.243-1.952-1.09-0.1571.189-0.415
13-0.998-1.3040.191-1.1910.047-0.914-0.9980.0470.5090.2171.4010.637-1.576-0.764-0.157-0.519
14-0.415-1.4310.703-0.998-0.519-1.09-0.157-0.5190.489-0.4661.318-0.697-0.836-0.5750.879-0.836
15-0.016-0.120.107-1.09-0.236-0.575-2.21-1.1910.5660.9311.1280.489-1.191-0.575-0.12-1.952